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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • golgi 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, golgi, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:golgi, nucleus
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr4P10230_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G48240.1 GSMUA_Achr4P10230_001 AT4G19030.1 21798944
AT3G17440.1 GSMUA_Achr4P10230_001 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr2P07740_001 Banana cytosol 60.78 22.96
GSMUA_Achr5P21000_001 Banana cytosol 58.82 22.56
GSMUA_Achr11P... Banana cytosol 56.86 21.8
Solyc12g098950.1.1 Tomato cytosol 53.92 20.37
PGSC0003DMT400011730 Potato cytosol 53.92 20.37
KRH19506 Soybean cytosol 52.94 20.07
AT3G17440.1 Thale cress cytosol 51.96 19.7
VIT_05s0020g00750.t01 Wine grape cytosol 51.96 19.7
KRH02465 Soybean cytosol 51.96 19.7
AT1G48240.1 Thale cress cytosol 50.98 19.62
CDX82368 Canola cytosol 51.96 19.56
Bra001663.1-P Field mustard cytosol 51.96 19.56
CDX75916 Canola cytosol 51.96 19.56
CDY48701 Canola cytosol 50.98 19.19
CDY63023 Canola cytosol 49.02 18.45
CDY66384 Canola cytosol 49.02 18.45
CDX92133 Canola cytosol 49.02 18.45
Bra022216.1-P Field mustard cytosol 49.02 18.45
Bra021248.1-P Field mustard cytosol 49.02 18.45
GSMUA_Achr11P... Banana cytosol 44.12 17.65
GSMUA_Achr10P... Banana cytosol 45.1 17.04
CDX77329 Canola cytosol 33.33 14.98
Bra014118.1-P Field mustard cytosol 16.67 11.11
CDY41849 Canola cytosol 16.67 11.11
CDY53169 Canola cytosol, endoplasmic reticulum, mitochondrion, nucleus 12.75 10.16
CDY41852 Canola cytosol 14.71 9.8
HORVU1Hr1G069840.13 Barley extracellular 7.84 3.88
GSMUA_Achr2P07950_001 Banana cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:GSMUA_Achr2P07960_001EnsemblPlants:GSMUA_Achr2T07960_001EnsemblPlantsGene:GSMUA_Achr2G07960_001ncoils:CoilPANTHER:PTHR21230PANTHER:PTHR21230:SF35
UniParc:UPI00029626FBUniProt:M0S637MapMan:22.7.2.4:::
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G07960_001]
Coordinates
chr2:+:12169972..12173123
Molecular Weight (calculated)
11963.3 Da
IEP (calculated)
9.258
GRAVY (calculated)
-0.999
Length
102 amino acids
Sequence
(BLAST)
001: MRECKRLIKE FDCEIKDQES RNTPDVSKQL NEKKQTMIKE LNLYAAMRKT YQNSLGNQRI ELFDMGAGGT NNQSNDMLLP RAWWIGGPNF VRTEHRTERN
101: AL
Best Arabidopsis Sequence Match ( AT3G17440.2 )
(BLAST)
001: MASNLPMSPQ LEQIHGEIRD HFRALANGFQ RLDKIKDSTR QSKQLEELTD KMRECKRLVK EFDRELKDEE ARNSPEVNKQ LNDEKQSMIK ELNSYVALRK
101: TYMSTLGNKK VELFDMGAGV SGEPTAEENV QVASSMSNQE LVDAGMKRMD ETDQAIERSK QVVEQTLEVG TQTAANLKGQ TDQMGRVVNH LDTIQFSIKK
201: ASQLVKEIGR QVCGYR
Arabidopsis Description
NPSN13Novel plant SNARE 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRP1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.