Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY63023 | Canola | cytosol | 56.86 | 32.1 |
| CDX75916 | Canola | cytosol | 55.56 | 31.37 |
| CDY48701 | Canola | cytosol | 55.56 | 31.37 |
| Solyc12g098950.1.1 | Tomato | cytosol | 54.9 | 31.11 |
| CDX82368 | Canola | cytosol | 54.9 | 31.0 |
| CDY66384 | Canola | cytosol | 54.9 | 31.0 |
| CDX92133 | Canola | cytosol | 54.25 | 30.63 |
| KRH19506 | Soybean | cytosol | 53.59 | 30.48 |
| PGSC0003DMT400011730 | Potato | cytosol | 53.59 | 30.37 |
| KRH02465 | Soybean | cytosol | 52.29 | 29.74 |
| GSMUA_Achr5P21000_001 | Banana | cytosol | 49.67 | 28.57 |
| GSMUA_Achr2P07740_001 | Banana | cytosol | 49.67 | 28.15 |
| VIT_05s0020g00750.t01 | Wine grape | cytosol | 49.02 | 27.88 |
| GSMUA_Achr11P... | Banana | cytosol | 48.37 | 27.82 |
| Zm00001d022275_P001 | Maize | plasma membrane | 47.06 | 27.17 |
| TraesCS2D01G154800.1 | Wheat | cytosol | 47.71 | 27.14 |
| TraesCS2B01G174800.1 | Wheat | cytosol | 47.71 | 27.14 |
| TraesCS2A01G149700.1 | Wheat | cytosol | 47.71 | 27.14 |
| CDX84617 | Canola | cytosol, golgi, peroxisome | 46.41 | 27.1 |
| CDY69072 | Canola | cytosol, golgi, peroxisome | 46.41 | 27.1 |
| CDY59046 | Canola | cytosol, golgi, peroxisome | 46.41 | 27.1 |
| Os07t0637400-01 | Rice | plasma membrane | 47.06 | 27.07 |
| Zm00001d006939_P001 | Maize | cytosol | 46.41 | 26.79 |
| EER97617 | Sorghum | cytosol | 47.06 | 26.77 |
| Zm00001d029281_P007 | Maize | extracellular, plasma membrane | 47.71 | 26.55 |
| EER92219 | Sorghum | cytosol | 47.06 | 26.37 |
| CDX84253 | Canola | cytosol, nucleus, peroxisome | 45.1 | 26.14 |
| CDY31671 | Canola | cytosol, nucleus, peroxisome | 45.1 | 26.14 |
| CDX77329 | Canola | cytosol | 38.56 | 25.99 |
| Os03t0369800-01 | Rice | plasma membrane | 45.75 | 25.45 |
| TraesCS4A01G162300.1 | Wheat | cytosol | 45.1 | 25.27 |
| TraesCS4B01G157900.2 | Wheat | cytosol | 44.44 | 24.91 |
| TraesCS4D01G161700.1 | Wheat | cytosol | 44.44 | 24.91 |
| CDY53169 | Canola | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 18.95 | 22.66 |
| CDY41849 | Canola | cytosol | 15.03 | 15.03 |
| GSMUA_Achr2P07960_001 | Banana | cytosol | 9.8 | 14.71 |
| HORVU2Hr1G026870.4 | Barley | plastid | 23.53 | 13.14 |
| HORVU1Hr1G069840.13 | Barley | extracellular | 7.84 | 5.83 |
| GSMUA_Achr2P07950_001 | Banana | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY41852 | EnsemblPlantsGene:GSBRNA2T00073782001 | GO:A0A078HVJ6 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR21230 | PANTHER:PTHR21230:SF35 | ProteinID:CDY41852 | ProteinID:CDY41852.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EE55F7 | UniProt:A0A078HVJ6 | MapMan:22.7.2.4 | : | : | : |
Description
BnaA08g03470DBnaA08g03470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HVJ6]
Coordinates
chrLK032508:+:200077..201197
Molecular Weight (calculated)
17239.2 Da
IEP (calculated)
8.394
GRAVY (calculated)
-0.005
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MYLRCLFCVN SFRDLNTVLG NKKVELFDSA GEPTAEENVH MASCESLSTS VEFKSSTRMD ETNQAIERSK QLSYTGKKCI PLGSLMINFR LIKWGRVGRQ
101: VATDKCIMMF LFLIVCCVIA IIVVKIVNPN NKDIRDIPGI GPPARCDREG YYT
101: VATDKCIMMF LFLIVCCVIA IIVVKIVNPN NKDIRDIPGI GPPARCDREG YYT
001: MRDCKRLVKE FDRELKDGEA RNSPQVNKQL NDEKQSMIKE LNSYVALRKT YLNTLGNKKV ELFDTGAGVS GEPTAEENVQ MASTMSNQEL VDAGMKRMDE
101: TDQAIERSKQ VVHQTLEVGT QTASNLKGQT DQMGRVVNDL DTIQFSLKKA SQLVKEIGRQ VATDKCIMAF LFLIVCGVIA IIIVKIVNPN NKDIRDIPGL
201: APPAQSRKLL YFRE
101: TDQAIERSKQ VVHQTLEVGT QTASNLKGQT DQMGRVVNDL DTIQFSLKKA SQLVKEIGRQ VATDKCIMAF LFLIVCGVIA IIIVKIVNPN NKDIRDIPGL
201: APPAQSRKLL YFRE
Arabidopsis Description
NPSN12Novel plant SNARE 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNH6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.