Factsheet for HORVU1Hr1G084610.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, plastid

Predictor Summary:

mitochondrion 1
cytosol 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G108760.1	Barley	plastid	60.83	71.35
HORVU3Hr1G094610.2	Barley	plastid	58.53	32.07
HORVU3Hr1G068710.2	Barley	endoplasmic reticulum, vacuole	64.98	31.97
TraesCS3B01G468300.1	Wheat	nucleus	47.93	27.73
TraesCS3A01G432400.1	Wheat	nucleus	48.39	27.27
TraesCS3D01G425600.1	Wheat	nucleus, plastid	43.78	24.48
Os01t0922100-01	Rice	nucleus	40.55	21.05
EES04120	Sorghum	nucleus	38.25	20.29
GSMUA_Achr9P01390_001	Banana	nucleus	25.35	19.3
KRH51141	Soybean	nucleus	23.5	18.61
Zm00001d042325_P001	Maize	nucleus	34.56	18.38
GSMUA_Achr9P29340_001	Banana	nucleus	23.96	18.31
CDX82920	Canola	nucleus, plastid	27.65	17.91
CDX79134	Canola	nucleus, plastid	27.19	17.72
Bra013598.1-P	Field mustard	nucleus, plastid	27.19	17.72
VIT_10s0116g00350.t01	Wine grape	nucleus, plastid	26.27	16.76
KRH11496	Soybean	plastid	27.65	16.71
CDX98735	Canola	nucleus, plastid	24.42	16.61
Bra019393.1-P	Field mustard	nucleus	24.42	16.56
PGSC0003DMT400043110	Potato	nucleus	25.35	15.67
Solyc02g081150.1.1	Tomato	nucleus	24.88	15.47
AT4G22190.1	Thale cress	plastid	25.81	14.47

Protein Annotations

EnsemblPlants:HORVU1Hr1G084610.1	EnsemblPlantsGene:HORVU1Hr1G084610	PANTHER:PTHR35132	PANTHER:PTHR35132:SF2	SEG:seg	UniParc:UPI000B469828
UniProt:A0A287GJZ0	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:534220609..534221476

Molecular Weight (calculated)

22775.1 Da

IEP (calculated)

6.018

GRAVY (calculated)

-0.689

Length

217 amino acids

Sequence
(BLAST)

001: SSWSGQEKKN PSSPTHLAHP APLGRPAPPI SDLQPAVGLA GLVTADQLFS DGIVLPLHTL QAPPAGPDAD QHQGQDQDAM EDADQDRNAD VNEPSDPPEQ
101: EGEAAEQVQP LAEACAVPTP DLPAVTFKWK DIFKPTGESK ERAKKAERRV SSVSGNAELI NINIWPFSRS RSAGHSTSSA GAGASSKAKT SSPRWSRCRT
201: SRAGSSAPTI SACTASR

Best Arabidopsis Sequence Match ( AT4G22190.1 )
(BLAST)

001: MCYVPQTLHI WSHCTCSSSF LSLTNSLIYY LLLLLRPSKT LSLSLSSTMD SPTSIRSKPL PETLSPCGSQ RRRSSCDSNP PEFEFWRLTN SSFPQADSDL
101: LSADELFHDG VLLPLDLLSV KSELQSDPNI AECDPDPSPS TGSLITEQKS DLEPGLGSEL TRETTVSKRW RDIFRKSETK PPGKKEKVKE NKKEKKKTGS
201: GPSSGSGSGA ELNINIWPFS RSRSAGNNVT RPRMSFGAPT TRKVSSAPCS RSNSTGESKS RKWPSSPSRN GVHLGRNSPV WQVRRGGGAP VGKTIPEPMG
301: RVVGKREIPE TRKGKTVIES NKAKVLNLNV PMCIGYRSRL SCRTEESSGG GNSNIGSDNN NNNNANANNP NPNGLFGFRN LFIKKVY

Arabidopsis Description

Serine/arginine repetitive matrix-like protein [Source:UniProtKB/TrEMBL;Acc:Q8L4C5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.