Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G084610.1 | Barley | cytosol, nucleus, plastid | 71.35 | 60.83 |
| HORVU3Hr1G094610.2 | Barley | plastid | 67.57 | 31.57 |
| HORVU3Hr1G068710.2 | Barley | endoplasmic reticulum, vacuole | 61.08 | 25.62 |
| TraesCS3B01G468300.1 | Wheat | nucleus | 51.35 | 25.33 |
| TraesCS3D01G425600.1 | Wheat | nucleus, plastid | 49.73 | 23.71 |
| TraesCS3A01G432400.1 | Wheat | nucleus | 45.95 | 22.08 |
| Zm00001d042325_P001 | Maize | nucleus | 39.46 | 17.89 |
| GSMUA_Achr9P01390_001 | Banana | nucleus | 25.41 | 16.49 |
| Os01t0922100-01 | Rice | nucleus | 36.76 | 16.27 |
| GSMUA_Achr9P29340_001 | Banana | nucleus | 24.32 | 15.85 |
| CDX82920 | Canola | nucleus, plastid | 28.11 | 15.52 |
| KRH51141 | Soybean | nucleus | 22.7 | 15.33 |
| CDX79134 | Canola | nucleus, plastid | 27.57 | 15.32 |
| Bra013598.1-P | Field mustard | nucleus, plastid | 27.57 | 15.32 |
| EES04120 | Sorghum | nucleus | 32.97 | 14.91 |
| CDX98735 | Canola | nucleus, plastid | 24.86 | 14.42 |
| VIT_10s0116g00350.t01 | Wine grape | nucleus, plastid | 26.49 | 14.41 |
| Bra019393.1-P | Field mustard | nucleus | 24.32 | 14.06 |
| KRH11496 | Soybean | plastid | 25.95 | 13.37 |
| PGSC0003DMT400043110 | Potato | nucleus | 24.32 | 12.82 |
| Solyc02g081150.1.1 | Tomato | nucleus | 23.24 | 12.32 |
| AT4G22190.1 | Thale cress | plastid | 25.41 | 12.14 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G108760.1 | EnsemblPlantsGene:HORVU7Hr1G108760 | PANTHER:PTHR35132 | PANTHER:PTHR35132:SF2 | SEG:seg | UniParc:UPI000B487311 |
| UniProt:A0A287XRW8 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:626184280..626185151
Molecular Weight (calculated)
20124.4 Da
IEP (calculated)
4.554
GRAVY (calculated)
-0.725
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: SLSSWSGXEK KPFFSNTPSP PCSSRPPAPP ISDLQPAVGL AGLVTADQLF SDGIVLPLHT LQAPPAGPDA DQHQGQDQDA MEDADQDRNA DVNEPSDPPE
101: QEGEAAEQVQ PLAEACAVPT PDLPAVTFKW KDIFKPTGES KERAKKAERR VSSVSGNAEL ININIWPFSP EPLRWPLYLQ RRRRR
101: QEGEAAEQVQ PLAEACAVPT PDLPAVTFKW KDIFKPTGES KERAKKAERR VSSVSGNAEL ININIWPFSP EPLRWPLYLQ RRRRR
001: MCYVPQTLHI WSHCTCSSSF LSLTNSLIYY LLLLLRPSKT LSLSLSSTMD SPTSIRSKPL PETLSPCGSQ RRRSSCDSNP PEFEFWRLTN SSFPQADSDL
101: LSADELFHDG VLLPLDLLSV KSELQSDPNI AECDPDPSPS TGSLITEQKS DLEPGLGSEL TRETTVSKRW RDIFRKSETK PPGKKEKVKE NKKEKKKTGS
201: GPSSGSGSGA ELNINIWPFS RSRSAGNNVT RPRMSFGAPT TRKVSSAPCS RSNSTGESKS RKWPSSPSRN GVHLGRNSPV WQVRRGGGAP VGKTIPEPMG
301: RVVGKREIPE TRKGKTVIES NKAKVLNLNV PMCIGYRSRL SCRTEESSGG GNSNIGSDNN NNNNANANNP NPNGLFGFRN LFIKKVY
101: LSADELFHDG VLLPLDLLSV KSELQSDPNI AECDPDPSPS TGSLITEQKS DLEPGLGSEL TRETTVSKRW RDIFRKSETK PPGKKEKVKE NKKEKKKTGS
201: GPSSGSGSGA ELNINIWPFS RSRSAGNNVT RPRMSFGAPT TRKVSSAPCS RSNSTGESKS RKWPSSPSRN GVHLGRNSPV WQVRRGGGAP VGKTIPEPMG
301: RVVGKREIPE TRKGKTVIES NKAKVLNLNV PMCIGYRSRL SCRTEESSGG GNSNIGSDNN NNNNANANNP NPNGLFGFRN LFIKKVY
Arabidopsis Description
Serine/arginine repetitive matrix-like protein [Source:UniProtKB/TrEMBL;Acc:Q8L4C5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.