Factsheet for Os01t0922100-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G468300.1	Wheat	nucleus	50.96	56.8
HORVU3Hr1G094610.2	Barley	plastid	53.11	56.06
TraesCS3A01G432400.1	Wheat	nucleus	51.2	55.58
TraesCS3D01G425600.1	Wheat	nucleus, plastid	50.24	54.12
HORVU3Hr1G068710.2	Barley	endoplasmic reticulum, vacuole	55.26	52.38
EES04120	Sorghum	nucleus	49.04	50.12
Zm00001d042325_P001	Maize	nucleus	46.65	47.79
HORVU1Hr1G084610.1	Barley	cytosol, nucleus, plastid	21.05	40.55
HORVU7Hr1G108760.1	Barley	plastid	16.27	36.76
KRH51141	Soybean	nucleus	22.97	35.04
GSMUA_Achr9P01390_001	Banana	nucleus	23.68	34.74
GSMUA_Achr9P29340_001	Banana	nucleus	23.45	34.51
Os11t0497350-00	Rice	mitochondrion, nucleus	25.84	34.29
CDX82920	Canola	nucleus, plastid	26.79	33.43
CDX79134	Canola	nucleus, plastid	26.32	33.03
Bra013598.1-P	Field mustard	nucleus, plastid	26.32	33.03
Bra019393.1-P	Field mustard	nucleus	24.88	32.5
PGSC0003DMT400043110	Potato	nucleus	27.03	32.19
Solyc02g081150.1.1	Tomato	nucleus	26.79	32.09
VIT_10s0116g00350.t01	Wine grape	nucleus, plastid	25.84	31.76
CDX98735	Canola	nucleus, plastid	23.92	31.35
AT4G22190.1	Thale cress	plastid	26.32	28.42
KRH11496	Soybean	plastid	24.4	28.41

Protein Annotations

EnsemblPlants:Os01t0922100-01	EnsemblPlantsGene:Os01g0922100	EntrezGene:4327244	PANTHER:PTHR35132	PANTHER:PTHR35132:SF2	ProteinID:BAD88379.1
ProteinID:BAF07146.1	ProteinID:BAS75949.1	RefSeq:XP_015635360.1	SEG:seg	UniParc:UPI00004C2C2A	UniProt:Q5JJH8
MapMan:35.2	:	:	:	:	:

Description

Conserved hypothetical protein. (Os01t0922100-01)

Coordinates

chr1:-:40285434..40287011

Molecular Weight (calculated)

41584.0 Da

IEP (calculated)

6.547

GRAVY (calculated)

-0.316

Length

418 amino acids

Sequence
(BLAST)

001: MEVFDEAAVV VAAPPPPQPE CGAAAAVVGG EPGWSSPSPA ASPEFEFWMV GKNPSSFQSP ALLTADELFS DGIVLPLRTL QQVPSGEGDG EGEEGEGEGD
101: AAAVESSDLP EAAAQRVAES GGPAPTPDLP AVTFKWKDIF KATGGGESKD RKKVERRVSS VGGNGELINI NIWPFSRSRS AGHSAAGAGT AAAGAALSRN
201: KSNPNANVNA NASNNAAAAA AAAATAPAAA TAPGPAPARK VSSAPCSRSN SRGETSAAAP PPSIATAACA AAAAAATAPA PAPATSMLRR LVPGHGRTGA
301: LTVTGIRLGR ASPVWQLRRN KLQQQGAAAE QKQSSDTPTP TTAATKKKAT ATTTTAATPT TQDVDGEDKA AASATTPAAA AATAGCRNNA SCSEAGGEES
401: NPPQGLFGLR TFFSKKVY

Best Arabidopsis Sequence Match ( AT4G22190.1 )
(BLAST)

001: MCYVPQTLHI WSHCTCSSSF LSLTNSLIYY LLLLLRPSKT LSLSLSSTMD SPTSIRSKPL PETLSPCGSQ RRRSSCDSNP PEFEFWRLTN SSFPQADSDL
101: LSADELFHDG VLLPLDLLSV KSELQSDPNI AECDPDPSPS TGSLITEQKS DLEPGLGSEL TRETTVSKRW RDIFRKSETK PPGKKEKVKE NKKEKKKTGS
201: GPSSGSGSGA ELNINIWPFS RSRSAGNNVT RPRMSFGAPT TRKVSSAPCS RSNSTGESKS RKWPSSPSRN GVHLGRNSPV WQVRRGGGAP VGKTIPEPMG
301: RVVGKREIPE TRKGKTVIES NKAKVLNLNV PMCIGYRSRL SCRTEESSGG GNSNIGSDNN NNNNANANNP NPNGLFGFRN LFIKKVY

Arabidopsis Description

Serine/arginine repetitive matrix-like protein [Source:UniProtKB/TrEMBL;Acc:Q8L4C5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.