Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plasma membrane, golgi, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G21070.1 | KRH11500 | AT4G04020.1 | 16957774 |
| AT4G21070.1 | KRH36517 | AT4G04020.1 | 16957774 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037622.1-P | Field mustard | nucleus | 2.45 | 63.64 |
| HORVU4Hr1G010810.1 | Barley | cytosol | 1.82 | 55.32 |
| Bra020883.1-P | Field mustard | nucleus | 24.72 | 39.31 |
| Solyc08g023280.2.1 | Tomato | nucleus | 27.38 | 39.18 |
| CDX76414 | Canola | nucleus | 24.3 | 38.73 |
| AT4G21070.1 | Thale cress | nucleus | 25.28 | 38.36 |
| CDX82797 | Canola | nucleus | 23.95 | 37.96 |
| CDY57063 | Canola | nucleus | 24.3 | 37.68 |
| PGSC0003DMT400013749 | Potato | nucleus | 27.8 | 37.56 |
| CDX79031 | Canola | nucleus | 24.3 | 37.39 |
| GSMUA_Achr6P29980_001 | Banana | nucleus | 24.58 | 35.82 |
| KRG95712 | Soybean | nucleus | 16.81 | 35.56 |
| KRH67433 | Soybean | nucleus | 16.81 | 35.4 |
| Os05t0512000-01 | Rice | extracellular | 24.44 | 35.36 |
| Zm00001d038667_P001 | Maize | nucleus | 22.06 | 34.28 |
| TraesCS1A01G329600.1 | Wheat | nucleus | 23.67 | 34.11 |
| EES18483 | Sorghum | nucleus | 23.74 | 34.04 |
| TraesCS1B01G343100.2 | Wheat | nucleus | 23.81 | 33.97 |
| HORVU1Hr1G077590.4 | Barley | plastid | 24.02 | 33.93 |
| TraesCS1D01G331700.1 | Wheat | nucleus | 22.27 | 33.06 |
Protein Annotations
Description
hypothetical protein
Coordinates
chr15:+:7085612..7094403
Molecular Weight (calculated)
160261.0 Da
IEP (calculated)
7.452
GRAVY (calculated)
-0.502
Length
1428 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSYAYNVFTW VLSYAYNVFT MIHNPNVFTW NTMTRGYAES DNPSPALRFY RQMIAISKSL NVREGEAIHS VTIRNGFESL VFVQNSLLHI YAACGDTESA
0101: HNVFEPSEAL TLFREMSAEG VEPDGFTVVS LLSASAELGA LELGRRVHVY LLKVGLRENS HVTNSLLDLY AKSLELFREM EGQGLVPSEI TFVGVLYACS
0201: HCGMLDEGFD YFRRMKEEFG IMPRIEHYGC MVDLLSRAGL VKQAYEYIQN MPVQPNAVTW RTLLGACTIH GHLGLGETAR SHLLKLEPKH SGDYVLLSNL
0301: YTSECRWADV QLIRRSMLKD GVKKTSGYSL VELGNRVYEF TMGNRSHPQS QDVYALLEKI TELLKLEGYV PHTANVLADI EEEEKEQALS YHTPGTTIRV
0401: MKNLRVCADC HMAIKLMAKV YDREIVIRDR VVLLVSVCAI AMGDLERMAR ELICPICWSL LDSAVSLTCN HLFCNSCVFK SMKSASACPV CKIPFTRREV
0501: RPAPHMDNLV SIYKNMEAAS GVNIFETQNA PVTNLSDGEK QCEVDANSGK MEAGGTHTGR PREKKTRKKK ESKKTVQASM ESSGSDFAKP SFPAKKRVQV
0601: PQNLLSETPM KSLKIGVSLS EINKEKEGTE KVPVMESERP LQREKDNPVL SPFFWLREEK DGERLSQQTD DDEIIDGSTP NPPSFSDLKD SDDEIPSNVA
0701: PMDEVQNKGS VNLFDSEMFE WTQRPCTPEL FSSPSKMQLQ VMDTYEDDEN QEELVASSLE LAENQPRVDA GNMKFDNPKE GNIMADVLPP SVSPQIRSTD
0801: DLNGMKKSTK RRRKGRDKNK QEHIGEPKNS IDEMHVDSYI SLEVTQEQAL DKSSNPRKDS RRDKRVCFNT STIPTPITAC TVPNTLGVQS IGEMKKAKNT
0901: DISPLKQENE KHHAQEISGK SRMKRSGKQN VSQTNEFAGS DSSIFSLQTD NNGKDSNSRQ CKSKYSRKSM SCSKELKATK RQKLSSDCIS KTKNVEEILP
1001: IESIHQGPDV RDLNDTSKEK HCPLMDQTAL RKCESHVTKY QCIFCLSSEE SETSGPMVHY LDGRPVTADY EGGSKVTHCH RNCTEWAPNV YFDGDNAINL
1101: EAEISRSRRI KCSFCGLKGA ALGCYEKSCR RSFHVPCANW TSQCRWDTQN FVMLCPLHAS SMLPCEGSGS QKRSKKCAAS EGKNHGLKHD TTNQSRAAHR
1201: SYKKIVLCCS ALSVQEREVV SEFERVSKAA VLKNWDSSVT HVIASTDENG ACRRTLKVLL GILEGKWILN IEWIKACMKE MGPVDEERYE INVDIHGIRD
1301: GPRLGRLRVL NKQPKLFYGY KFYVMGDFIP SYKGYLQDLL VAAGGIILHR KPVSGDQEST SPDTHPYQTL IIYSLELPDK CKPLKKDTIC SQRRHDAEVL
1401: ASSTGSKVAS NTWILNSIAA CKLKCLAQ
0101: HNVFEPSEAL TLFREMSAEG VEPDGFTVVS LLSASAELGA LELGRRVHVY LLKVGLRENS HVTNSLLDLY AKSLELFREM EGQGLVPSEI TFVGVLYACS
0201: HCGMLDEGFD YFRRMKEEFG IMPRIEHYGC MVDLLSRAGL VKQAYEYIQN MPVQPNAVTW RTLLGACTIH GHLGLGETAR SHLLKLEPKH SGDYVLLSNL
0301: YTSECRWADV QLIRRSMLKD GVKKTSGYSL VELGNRVYEF TMGNRSHPQS QDVYALLEKI TELLKLEGYV PHTANVLADI EEEEKEQALS YHTPGTTIRV
0401: MKNLRVCADC HMAIKLMAKV YDREIVIRDR VVLLVSVCAI AMGDLERMAR ELICPICWSL LDSAVSLTCN HLFCNSCVFK SMKSASACPV CKIPFTRREV
0501: RPAPHMDNLV SIYKNMEAAS GVNIFETQNA PVTNLSDGEK QCEVDANSGK MEAGGTHTGR PREKKTRKKK ESKKTVQASM ESSGSDFAKP SFPAKKRVQV
0601: PQNLLSETPM KSLKIGVSLS EINKEKEGTE KVPVMESERP LQREKDNPVL SPFFWLREEK DGERLSQQTD DDEIIDGSTP NPPSFSDLKD SDDEIPSNVA
0701: PMDEVQNKGS VNLFDSEMFE WTQRPCTPEL FSSPSKMQLQ VMDTYEDDEN QEELVASSLE LAENQPRVDA GNMKFDNPKE GNIMADVLPP SVSPQIRSTD
0801: DLNGMKKSTK RRRKGRDKNK QEHIGEPKNS IDEMHVDSYI SLEVTQEQAL DKSSNPRKDS RRDKRVCFNT STIPTPITAC TVPNTLGVQS IGEMKKAKNT
0901: DISPLKQENE KHHAQEISGK SRMKRSGKQN VSQTNEFAGS DSSIFSLQTD NNGKDSNSRQ CKSKYSRKSM SCSKELKATK RQKLSSDCIS KTKNVEEILP
1001: IESIHQGPDV RDLNDTSKEK HCPLMDQTAL RKCESHVTKY QCIFCLSSEE SETSGPMVHY LDGRPVTADY EGGSKVTHCH RNCTEWAPNV YFDGDNAINL
1101: EAEISRSRRI KCSFCGLKGA ALGCYEKSCR RSFHVPCANW TSQCRWDTQN FVMLCPLHAS SMLPCEGSGS QKRSKKCAAS EGKNHGLKHD TTNQSRAAHR
1201: SYKKIVLCCS ALSVQEREVV SEFERVSKAA VLKNWDSSVT HVIASTDENG ACRRTLKVLL GILEGKWILN IEWIKACMKE MGPVDEERYE INVDIHGIRD
1301: GPRLGRLRVL NKQPKLFYGY KFYVMGDFIP SYKGYLQDLL VAAGGIILHR KPVSGDQEST SPDTHPYQTL IIYSLELPDK CKPLKKDTIC SQRRHDAEVL
1401: ASSTGSKVAS NTWILNSIAA CKLKCLAQ
001: MADTSHLERM GRELKCPICL SLYNSAVSLS CNHVFCNACI VKSMKMDATC PVCKIPYHRR EIRGAPHMDS LVSIYKNMED ASGIKLFVSQ NNPSPSDKEK
101: QVRDASVEKA SDKNRQGSRK GRASKRNEYG KTKEIDVDAP GPIVMKPSSQ TKKRVQLLQN LSAESLTKPT ESVETAEKPK DYTENTVIRL DEHPSLNKEG
201: NLSPFFWLRD EDDGENSSQR TESDQLLGTT PVNVPSFSDL MDSDHESPSK EDEQQKPNPG DMFDSEMFEW TQRPCSPEIL PSPVKAKVLG RDEIDLTQKK
301: LPKVKVASSK CKNRKAGSAR NTVARRSIGV SQEDNMESSA AATISEQQDS RGTSGTIIRN DVNTDENVKA KRATRSKAQS TRVQSDLNVS NEADGKQGTK
401: RKRSSIKSSP AHPIAGPNEL SLGTEIVGKG DQDQAHGPSD THPEKRSPTE KPSLKKRGRK SNASSSLKDL SGKTQKKTSE KKLKLDSHMI SSKATQPHGN
501: GILTAGLNQG GDKQDSRNNR KSTVGKDDHT MQVIEKCSTI NKSSSGGSAH LRRCNGSLTK KFTCAFCQCS EDTEASGEMT HYYRGEPVSA DFNGGSKVIH
601: VHKNCAEWAP NVYFNDLTIV NLDVELTRSR RISCSCCGLK GAALGCYNKS CKNSFHVTCA KLIPECRWDN VKFVMLCPLD ASIKLPCEEA NSKDRKCKRT
701: PKEPLHSQPK QVSGKANIRE LHIKQFHGFS KKLVLSCSGL TVEEKTVIAE FAELSGVTIS KNWDSTVTHV IASINENGAC KRTLKFMMAI LEGKWILTID
801: WIKACMKNTK YVSEEPYEIT MDVHGIREGP YLGRQRALKK KPKLFTGLKF YIMGDFELAY KGYLQDLIVA AGGTILRRRP VSSDDNEAST IVVFSVEPSK
901: KKTLTQRRSD AEALAKSARA RAASSSWVLD SIAGCQILVL I
101: QVRDASVEKA SDKNRQGSRK GRASKRNEYG KTKEIDVDAP GPIVMKPSSQ TKKRVQLLQN LSAESLTKPT ESVETAEKPK DYTENTVIRL DEHPSLNKEG
201: NLSPFFWLRD EDDGENSSQR TESDQLLGTT PVNVPSFSDL MDSDHESPSK EDEQQKPNPG DMFDSEMFEW TQRPCSPEIL PSPVKAKVLG RDEIDLTQKK
301: LPKVKVASSK CKNRKAGSAR NTVARRSIGV SQEDNMESSA AATISEQQDS RGTSGTIIRN DVNTDENVKA KRATRSKAQS TRVQSDLNVS NEADGKQGTK
401: RKRSSIKSSP AHPIAGPNEL SLGTEIVGKG DQDQAHGPSD THPEKRSPTE KPSLKKRGRK SNASSSLKDL SGKTQKKTSE KKLKLDSHMI SSKATQPHGN
501: GILTAGLNQG GDKQDSRNNR KSTVGKDDHT MQVIEKCSTI NKSSSGGSAH LRRCNGSLTK KFTCAFCQCS EDTEASGEMT HYYRGEPVSA DFNGGSKVIH
601: VHKNCAEWAP NVYFNDLTIV NLDVELTRSR RISCSCCGLK GAALGCYNKS CKNSFHVTCA KLIPECRWDN VKFVMLCPLD ASIKLPCEEA NSKDRKCKRT
701: PKEPLHSQPK QVSGKANIRE LHIKQFHGFS KKLVLSCSGL TVEEKTVIAE FAELSGVTIS KNWDSTVTHV IASINENGAC KRTLKFMMAI LEGKWILTID
801: WIKACMKNTK YVSEEPYEIT MDVHGIREGP YLGRQRALKK KPKLFTGLKF YIMGDFELAY KGYLQDLIVA AGGTILRRRP VSSDDNEAST IVVFSVEPSK
901: KKTLTQRRSD AEALAKSARA RAASSSWVLD SIAGCQILVL I
Arabidopsis Description
BRCA1Protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q8RXD4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.