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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:nucleus, secretory
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:secretory
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH67433 Soybean nucleus 92.0 91.59
Solyc09g066080.1.1 Tomato cytosol 19.85 54.92
Solyc12g041980.1.1 Tomato mitochondrion 18.81 51.63
VIT_07s0005g03940.t01 Wine grape plastid 30.67 49.4
Solyc05g016230.2.1 Tomato nucleus 31.7 47.66
PGSC0003DMT400038153 Potato endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 43.11 41.28
Solyc06g008210.2.1 Tomato endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 42.81 41.17
Solyc09g066090.2.1 Tomato nucleus 13.19 40.83
CDY10084 Canola vacuole 40.3 39.02
AT1G04020.1 Thale cress nucleus 40.89 38.71
Os04t0512400-01 Rice cytosol 35.56 38.16
GSMUA_Achr8P12560_001 Banana nucleus 36.0 38.15
EES12490 Sorghum cytosol, nucleus, plasma membrane 33.93 36.76
HORVU2Hr1G088840.1 Barley nucleus 33.63 36.5
TraesCS2A01G384900.1 Wheat nucleus 33.19 36.3
TraesCS2D01G381600.1 Wheat cytosol, nucleus, plasma membrane 33.33 35.71
Zm00001d003040_P001 Maize extracellular, nucleus, vacuole 34.37 35.64
TraesCS2B01G401900.1 Wheat nucleus, plasma membrane, vacuole 30.07 35.55
Solyc12g042000.1.1 Tomato nucleus 10.67 34.78
HORVU2Hr1G088910.1 Barley plastid 17.63 31.07
GSMUA_Achr8P13610_001 Banana cytosol 23.85 29.43
CDY68257 Canola mitochondrion, plastid 10.07 29.18
OQU85242 Sorghum nucleus 17.48 28.16
TraesCS1B01G315000.1 Wheat nucleus 19.56 26.35
Zm00001d017078_P002 Maize cytosol 20.44 26.14
TraesCS1D01G304000.1 Wheat nucleus 20.15 26.0
Os05t0486600-01 Rice mitochondrion 21.48 25.99
Bra032532.1-P Field mustard nucleus 41.19 24.62
CDY32524 Canola cytosol 37.78 23.31
TraesCS2D01G142000.2 Wheat mitochondrion, plastid 20.74 21.34
TraesCS2A01G139100.2 Wheat mitochondrion, plastid 20.59 21.12
KXG22233 Sorghum nucleus 21.33 20.93
TraesCS2B01G163200.1 Wheat golgi, plasma membrane 20.44 20.78
HORVU1Hr1G069020.11 Barley plastid 21.48 20.74
HORVU0Hr1G002630.3 Barley mitochondrion 20.3 20.45
TraesCS1B01G315300.1 Wheat plastid 21.93 19.25
TraesCS1D01G304600.1 Wheat nucleus, plastid 21.63 19.01
TraesCS1A01G304700.1 Wheat nucleus 22.22 18.45
KRH11144 Soybean endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 35.56 16.81
Protein Annotations
EntrezGene:100306420MapMan:14.3.1.1Gene3D:3.30.40.10Gene3D:3.40.50.10190EMBL:ACUP02012131InterPro:BRCA1-associated
InterPro:BRCT_domInterPro:BRCT_dom_sfInterPro:EPHDEnsemblPlantsGene:GLYMA_19G166900GO:GO:0000724GO:GO:0003674
GO:GO:0003824GO:GO:0004842GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0005886GO:GO:0006139GO:GO:0006259GO:GO:0006281GO:GO:0006464
GO:GO:0006629GO:GO:0006950GO:GO:0006974GO:GO:0007049GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016043GO:GO:0016567GO:GO:0016740
GO:GO:0019538GO:GO:0031436GO:GO:0035066GO:GO:0035067GO:GO:0042127GO:GO:0045717
GO:GO:0045944GO:GO:0046872GO:GO:0070531GO:GO:0071158UniProt:I1N9T1InterPro:IPR001357
InterPro:IPR001841InterPro:IPR013083InterPro:IPR034732InterPro:IPR036420EnsemblPlants:KRG95712ProteinID:KRG95712
ProteinID:KRG95712.1PFAM:PF00533PFAM:PF13771PFAM:PF13920PFAM:PF16589ScanProsite:PS00518
PFscan:PS50089PFscan:PS50172PFscan:PS51805PANTHER:PTHR13763SMART:SM00184SMART:SM00292
SUPFAM:SSF52113SUPFAM:SSF57850UniParc:UPI00023DE64EInterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDInterPro:Znf_RING_CS
Description
hypothetical protein
Coordinates
chr19:+:42803565..42810315
Molecular Weight (calculated)
74347.3 Da
IEP (calculated)
7.830
GRAVY (calculated)
-0.320
Length
675 amino acids
Sequence
(BLAST)
001: MDDSGSKTKL LNPWMLHFQK LALELKCPLC LSLFKRPVLL PCNHLFCNSC LADCITAGPG CAVCKATYAQ TDVRHVPFVE NVVAIYRSLD ATFCASLFQP
101: CSSGDGRVLE PCQAILNSTS SSLKAAKLPR NLTNSNEVGV GKNFKSKSVV HDKAEEFELS RERGKPNPMQ SSHMELGGRE ECGVMEMDVN QVTQSAPDSP
201: PFCDTKGSDN DFSDQGSEHP LLPGRLENSS LKRAGTGNGN LKERMGQLRS ESSASETEGL ARDLKRQKNL DFKPGKEPGA PLPKIDMCPT GRICSFCQSS
301: KISEATGPML HYANGNLVTG DAAMKPNVIP VHRICIDWAP QVYFVGEVVK NLKAEVARGA KLKCSKCNLK GAALGCYVKS CRRTYHVPCA MDISDCRWDH
401: EDFLLLCPVH SNVKFPCEKI RSKKKATQKH PTFSHLPSHH SNRLEASQDA SKKLVFCGSA LSNEEKVFLI NYASKVGATV TKFWTSNVTH VIAATDAHGA
501: CSRTLKVLMA ILNGRWVLKM DWIKACMQEI NPVEEEPYEI NLDNQGCQGG PKAGRLRALA NEPKLFSGLK FYFSGDYVST YKEDLEELIE VGGGTVLRIK
601: EELEAHRHEC KGDSSKLLVV YNLDPPQGCK LGEEVSILWQ RLNDAEDLAA NTLQVIGHTW ILESIAACKL QPFVY
Best Arabidopsis Sequence Match ( AT1G04020.1 )
(BLAST)
001: MAEFTNMLMN PWVLHLQKLE LELKCPLCLK LLNRPVLLPC DHVFCDSCVH KSSQVESGCP VCKSKHPKKA RRDLRFMESV ISIYKSLNAA VSVHLPQLQI
101: PNDCNYKNDA LNNSNSPKHG ESEDSEMTDK DVSKRSGGTD SSSRDGSPLP TSEESDPRPK HQDWTEKQLS DHLLLYEFES EYDAANHTPE SYTEQAAKNV
201: RDITASEQPS NAARKRICGD SFIQESSPNP KTQDPTLLRL MESLRSDDPT DYVKAQNHQL PKSHTEQDSK RKRDITASDA MENHLKVPKR ENNLMQKSAD
301: IDCNGKCSAN SDDQLSEKIS KALEQTSSNI TICGFCQSAR VSEATGEMLH YSRGRPVDGD DIFRSNVIHV HSACIEWAPQ VYYEGDTVKN LKAELARGMK
401: IKCTKCSLKG AALGCFVKSC RRSYHVPCAR EISRCRWDYE DFLLLCPAHS SVKFPNEKSG HRVSRAEPLP KINPAELCSL EQTPAFTKEL VLCGSALSKS
501: DKKLMESLAV RFNATISRYW NPSVTHVIAS TDEKGACTRT LKVLMGILNG KWIINAAWMK ASLKASQPVD EEPFEIQIDT QGCQDGPKTA RLRAETNKPK
601: LFEGLKFYFF GDFYKGYKED LQNLVKVAGG TILNTEDELG AESSNNVNDQ RSSSIVVYNI DPPHGCALGE EVTIIWQRAN DAEALASQTG SRLVGHTWVL
701: ESIAGYKLHP VIG
Arabidopsis Description
ATBARD1Breast cancer associated RING 1 [Source:UniProtKB/TrEMBL;Acc:A0A2H1ZEA6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.