Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d022115_P002 | Maize | extracellular, mitochondrion, plasma membrane | 96.44 | 96.28 |
| Os08t0323000-01 | Rice | cytosol, plasma membrane | 61.69 | 84.45 |
| HORVU5Hr1G042050.1 | Barley | cytosol | 84.92 | 83.36 |
| TraesCS5A01G129400.1 | Wheat | cytosol | 84.75 | 83.33 |
| TraesCS5B01G128000.2 | Wheat | cytosol | 84.92 | 81.86 |
| TraesCS5D01G136900.2 | Wheat | cytosol | 83.73 | 80.72 |
| GSMUA_Achr9P05240_001 | Banana | cytosol | 70.17 | 68.89 |
| VIT_17s0000g00300.t01 | Wine grape | cytosol | 66.44 | 65.88 |
| CDX86945 | Canola | cytosol | 65.08 | 63.79 |
| CDY00241 | Canola | cytosol | 65.08 | 63.79 |
| CDY30688 | Canola | cytosol | 65.08 | 63.58 |
| PGSC0003DMT400040071 | Potato | cytosol | 52.88 | 63.03 |
| Solyc03g093970.2.1 | Tomato | cytosol, plastid | 64.07 | 62.79 |
| AT5G61970.1 | Thale cress | cytosol | 64.24 | 62.64 |
| Solyc02g062810.2.1 | Tomato | nucleus | 63.56 | 62.29 |
| KRH59740 | Soybean | cytosol, endoplasmic reticulum | 63.05 | 61.69 |
| Os08t0323266-00 | Rice | cytosol | 7.63 | 57.69 |
| Solyc02g062840.1.1 | Tomato | extracellular | 9.32 | 56.7 |
| Bra036933.1-P | Field mustard | cytosol | 7.12 | 54.55 |
| KRH41061 | Soybean | cytosol | 59.49 | 50.94 |
| Solyc02g062830.1.1 | Tomato | plasma membrane | 12.03 | 47.65 |
| Solyc04g048930.1.1 | Tomato | nucleus | 4.92 | 35.8 |
Protein Annotations
| Gene3D:1.10.3450.40 | MapMan:23.3.1.1.6 | UniProt:A0A1B6QFH8 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005047 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005786 | GO:GO:0006614 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008312 | GO:GO:0030529 |
| GO:GO:0030942 | InterPro:IPR038253 | EnsemblPlants:KXG36669 | ProteinID:KXG36669 | ProteinID:KXG36669.1 | PFAM:PF16969 |
| PIRSF:PIRSF038995 | PANTHER:PTHR12860 | EnsemblPlantsGene:SORBI_3002G371700 | InterPro:SRP68 | InterPro:SRP68-RBD | InterPro:SRP68_N_sf |
| UniParc:UPI0001C80E50 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:73020447..73028342
Molecular Weight (calculated)
66897.9 Da
IEP (calculated)
8.663
GRAVY (calculated)
-0.468
Length
590 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKPADQQPS DMQVDSSSAV EEKPAIRFSI NVLELMREAQ MQHGLRQSDY TRYRRYCSAR LRRLYKSLKF LHGRGKYTRR NITESTVTDV RFLHVVFYMA
101: ERAWSHAMEK KTAGTNAQQR IYMLGRFRKA VKWASLFSQL CSVKGDSRTS LEAEAYASYM KGALFFEQDK NIDAAMINFK NTRAIYEELG KYGSIENQLL
201: CRQRIDEVEP MIDFCSHKLG GSYLQAHELL DTANDLLKAK MEAVLAETRS QQAASMTEFN WLGRTFPITN AKTRVSILKA QQLERDLSAT ESVAADKKLA
301: IFDKIFSAYH DARSCIRNDL ASAGNAEDIR DDLNGLDKAV SAVLGLRTIE RNQLLVSIAK SKFTKHRDEK NERITKPEEL VRLYDLLIQN ATDLTDLVSS
401: GRNKNEEENS FIHEYELKGL AFRAERCFFL AKSYSSAGKR AEAYALFCHA HTLTDSALQQ LANSHDKALI QDLKSLSDNC RSNSCIEHAT GIMEEEIVPL
501: KLSKGVSTMS LADGKAKENK YLLDMLESYE SAIGEPNTKA PCRIAQFPPP FQAVPCNPIV LDMAYNAVEF PSLENRMKKE KKGLLSRFWG
101: ERAWSHAMEK KTAGTNAQQR IYMLGRFRKA VKWASLFSQL CSVKGDSRTS LEAEAYASYM KGALFFEQDK NIDAAMINFK NTRAIYEELG KYGSIENQLL
201: CRQRIDEVEP MIDFCSHKLG GSYLQAHELL DTANDLLKAK MEAVLAETRS QQAASMTEFN WLGRTFPITN AKTRVSILKA QQLERDLSAT ESVAADKKLA
301: IFDKIFSAYH DARSCIRNDL ASAGNAEDIR DDLNGLDKAV SAVLGLRTIE RNQLLVSIAK SKFTKHRDEK NERITKPEEL VRLYDLLIQN ATDLTDLVSS
401: GRNKNEEENS FIHEYELKGL AFRAERCFFL AKSYSSAGKR AEAYALFCHA HTLTDSALQQ LANSHDKALI QDLKSLSDNC RSNSCIEHAT GIMEEEIVPL
501: KLSKGVSTMS LADGKAKENK YLLDMLESYE SAIGEPNTKA PCRIAQFPPP FQAVPCNPIV LDMAYNAVEF PSLENRMKKE KKGLLSRFWG
001: MGKKQSEISA MEIDDPKSES SDQILPRFSI NVLQLMKSSQ AQHGLRHGDY ARYRRYCSAR LRRLYKSLKF THGRGKYTRR AILESTVTDV RFLHVVFYMA
101: ERAWSHAMEK RQLPDGPNAR QRIYLVGRLR KAVKWASLFS SLCSIKTDSR TSLEAEAYAS YMKGTLLFEQ DQNWETGLAC FKNARAVYEE LGKYGDLENQ
201: VLCRERVEEL EPSIRYCLHK IGKSNLQTSE LLQIGEMEGP ALDLFKAKIE AAMEEARSQQ AASLTEFSWL GYRFPVSNPK SRVSILKAQE LEKELQSPTA
301: ESLPAEKKLT IFDKLFTAYH DARNTIRSDL VSAGNAESVK DDLNGLDKAV GAVLGQRTIE RNQLLVKVAK SKLNRKRDDK NDKVTRPEEL VRLYDLLLQN
401: VADLSDLISS GRDRKPEEIA FEEECQRTSL AFRAERCFYL AKSYSLAGKR AEAFALYSRA RSLAEDALNK FQSIAKKDEG TIQELKTLIK ECRANSCIEH
501: ATGIMEEERA PENLSNRMST ISLNNTAAQV EEKYLLDKLD VYESAVGDSN TKTAPKIERF PPALQSIPRN PIVLDLAYNC IDFPVIENRM KKKGGFFSSR
601: ISSLW
101: ERAWSHAMEK RQLPDGPNAR QRIYLVGRLR KAVKWASLFS SLCSIKTDSR TSLEAEAYAS YMKGTLLFEQ DQNWETGLAC FKNARAVYEE LGKYGDLENQ
201: VLCRERVEEL EPSIRYCLHK IGKSNLQTSE LLQIGEMEGP ALDLFKAKIE AAMEEARSQQ AASLTEFSWL GYRFPVSNPK SRVSILKAQE LEKELQSPTA
301: ESLPAEKKLT IFDKLFTAYH DARNTIRSDL VSAGNAESVK DDLNGLDKAV GAVLGQRTIE RNQLLVKVAK SKLNRKRDDK NDKVTRPEEL VRLYDLLLQN
401: VADLSDLISS GRDRKPEEIA FEEECQRTSL AFRAERCFYL AKSYSLAGKR AEAFALYSRA RSLAEDALNK FQSIAKKDEG TIQELKTLIK ECRANSCIEH
501: ATGIMEEERA PENLSNRMST ISLNNTAAQV EEKYLLDKLD VYESAVGDSN TKTAPKIERF PPALQSIPRN PIVLDLAYNC IDFPVIENRM KKKGGFFSSR
601: ISSLW
Arabidopsis Description
Signal recognition particle subunit SRP68 [Source:UniProtKB/TrEMBL;Acc:Q9FH46]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.