CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59740	Soybean	cytosol, endoplasmic reticulum	78.81	90.05
VIT_17s0000g00300.t01	Wine grape	cytosol	63.57	73.61
Solyc03g093970.2.1	Tomato	cytosol, plastid	62.12	71.1
Solyc02g062810.2.1	Tomato	nucleus	61.97	70.93
PGSC0003DMT400040071	Potato	cytosol	50.65	70.51
AT5G61970.1	Thale cress	cytosol	61.54	70.08
Bra029296.1-P	Field mustard	cytosol	60.81	69.49
CDY30688	Canola	cytosol	60.67	69.21
CDY00241	Canola	cytosol	60.38	69.1
CDX86945	Canola	cytosol	60.23	68.94
GSMUA_Achr9P05240_001	Banana	cytosol	60.09	68.89
Bra010045.1-P	Field mustard	cytosol	59.36	67.6
HORVU5Hr1G042050.1	Barley	cytosol	52.1	59.73
TraesCS5A01G129400.1	Wheat	cytosol	51.81	59.5
KXG36669	Sorghum	cytosol	50.94	59.49
Zm00001d022115_P002	Maize	extracellular, mitochondrion, plasma membrane	50.94	59.39
TraesCS5D01G136900.2	Wheat	cytosol	51.96	58.5
TraesCS5B01G128000.2	Wheat	cytosol	51.67	58.17
Os08t0323000-01	Rice	cytosol, plasma membrane	36.14	57.77
Solyc02g062840.1.1	Tomato	extracellular	7.84	55.67
Solyc04g048930.1.1	Tomato	nucleus	6.1	51.85
Zm00001d053170_P001	Maize	cytosol	9.72	48.55
Solyc02g062830.1.1	Tomato	plasma membrane	10.45	48.32
Os08t0323266-00	Rice	cytosol	4.79	42.31
Zm00001d047530_P002	Maize	plastid	11.76	38.03
Zm00001d031206_P001	Maize	cytosol	9.72	37.22

Protein Annotations

Gene3D:1.10.3450.40	MapMan:23.3.1.1.6	UniProt:A0A0R0IL26	EMBL:ACUP02004749	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:GLYMA_08G008000	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005047
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005786	GO:GO:0006614	GO:GO:0006810	GO:GO:0008150	GO:GO:0008312	GO:GO:0030942
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	InterPro:IPR038253	EnsemblPlants:KRH41061	ProteinID:KRH41061
ProteinID:KRH41061.1	PFAM:PF13857	PFAM:PF16969	PIRSF:PIRSF038995	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR12860	SMART:SM00248	InterPro:SRP68	InterPro:SRP68-RBD	InterPro:SRP68_N_sf	SUPFAM:SSF48403
UniParc:UPI0006ED533E	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:612378..623124

Molecular Weight (calculated)

77593.4 Da

IEP (calculated)

8.296

GRAVY (calculated)

-0.453

Length

689 amino acids

Sequence
(BLAST)

001: MGKESRASAM EIDAPKSTSS DQIVPKFSIN VLQLLKSAQM QHGLRHGDYT RYRRYCTARL RRLYKSLKFT HGRGKYAKKA LTESTVTEVR FLHVILYTAE
101: RAWSHAMEKR QLPNGPNARQ RIYLIGRLRK AVKWATLFSL LCAVKADSRT SLEAEAYESY MKGSLLFEQD QNWDVALKNF KSARAVYEEL GKYGDLDNQV
201: LCRERVEELE PSIRYCLHKI GQSNLQASEL LQIGDVEGPA LDLFKAKLEA AMAEARSQQA ASMTEFIWLG HRFPISNAKT RVSILKSQEL EKDVHGPLAD
301: SIPADKRLVI FDKIFSAYHE ARGYIRADLA TTGSTESVKD DLNGLDKAVS AVLGERTIER NLLLVKVAKS KLANRHDDKN EKLTKPEELV RLYDLLLQNT
401: ADLSDLVNSG RDKKPEEVSF AEVCSYKSLA FRAQRCFYVA KSYSVAGKRA EAYALYCRAH NLADDALKKF QMLDGDNKIM MKELEDLCNE CRSNSCIEHA
501: SGIMEEKKTQ ENLSERVSNI SLTGTERLEK FLLEKLDVYE SAVGDSNVKC TPRIAGFPPA FQYSEKIFIP RTKKNHPVFS RAQLVQESIC GNDKKAVYQH
601: IVKSDFDINA IGWQASSDDS FDTASSNNLN IASQSENQPI EAIQDGSSVL HLACQTSDVG MVEQLLQHGA NINACDSRGR APLHTLLYY

Best Arabidopsis Sequence Match ( AT5G61970.1 )
(BLAST)

001: MGKKQSEISA MEIDDPKSES SDQILPRFSI NVLQLMKSSQ AQHGLRHGDY ARYRRYCSAR LRRLYKSLKF THGRGKYTRR AILESTVTDV RFLHVVFYMA
101: ERAWSHAMEK RQLPDGPNAR QRIYLVGRLR KAVKWASLFS SLCSIKTDSR TSLEAEAYAS YMKGTLLFEQ DQNWETGLAC FKNARAVYEE LGKYGDLENQ
201: VLCRERVEEL EPSIRYCLHK IGKSNLQTSE LLQIGEMEGP ALDLFKAKIE AAMEEARSQQ AASLTEFSWL GYRFPVSNPK SRVSILKAQE LEKELQSPTA
301: ESLPAEKKLT IFDKLFTAYH DARNTIRSDL VSAGNAESVK DDLNGLDKAV GAVLGQRTIE RNQLLVKVAK SKLNRKRDDK NDKVTRPEEL VRLYDLLLQN
401: VADLSDLISS GRDRKPEEIA FEEECQRTSL AFRAERCFYL AKSYSLAGKR AEAFALYSRA RSLAEDALNK FQSIAKKDEG TIQELKTLIK ECRANSCIEH
501: ATGIMEEERA PENLSNRMST ISLNNTAAQV EEKYLLDKLD VYESAVGDSN TKTAPKIERF PPALQSIPRN PIVLDLAYNC IDFPVIENRM KKKGGFFSSR
601: ISSLW

Arabidopsis Description

Signal recognition particle subunit SRP68 [Source:UniProtKB/TrEMBL;Acc:Q9FH46]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.