Factsheet for Os08t0323266-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
endoplasmic reticulum 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g048930.1.1	Tomato	nucleus	29.49	28.4
TraesCS5B01G128000.2	Wheat	cytosol	62.82	8.01
TraesCS5A01G129400.1	Wheat	cytosol	61.54	8.0
HORVU5Hr1G042050.1	Barley	cytosol	61.54	7.99
TraesCS5D01G136900.2	Wheat	cytosol	61.54	7.84
KXG36669	Sorghum	cytosol	57.69	7.63
KRH59740	Soybean	cytosol, endoplasmic reticulum	42.31	5.47
VIT_17s0000g00300.t01	Wine grape	cytosol	41.03	5.38
GSMUA_Achr9P05240_001	Banana	cytosol	39.74	5.16
AT5G61970.1	Thale cress	cytosol	39.74	5.12
CDY00241	Canola	cytosol	38.46	4.98
CDX86945	Canola	cytosol	38.46	4.98
Solyc03g093970.2.1	Tomato	cytosol, plastid	37.18	4.82
CDY30688	Canola	cytosol	37.18	4.8
KRH41061	Soybean	cytosol	42.31	4.79
Solyc02g062810.2.1	Tomato	nucleus	34.62	4.49
Solyc02g062830.1.1	Tomato	plasma membrane	5.13	2.68
Solyc02g062840.1.1	Tomato	extracellular	2.56	2.06
PGSC0003DMT400040071	Potato	cytosol	3.85	0.61
Zm00001d031206_P001	Maize	cytosol	1.28	0.56
Zm00001d047530_P002	Maize	plastid	1.28	0.47
Os08t0323000-01	Rice	cytosol, plasma membrane	1.28	0.23
Zm00001d053170_P001	Maize	cytosol	0.0	0.0
Bra036933.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.3450.40	MapMan:35.2	UniProt:A0A0P0XEL7	ProteinID:BAT04883.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005047	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005786	GO:GO:0006614	GO:GO:0006810	GO:GO:0008150	GO:GO:0008312
GO:GO:0030942	InterPro:IPR038253	EnsemblPlantsGene:Os08g0323266	EnsemblPlants:Os08t0323266-00	InterPro:SRP68_N_sf	UniParc:UPI00039386C2

Description

Similar to Signal recognition particle 68 kDa protein. (Os08t0323266-00)

Coordinates

chr8:-:14117415..14117751

Molecular Weight (calculated)

8843.7 Da

IEP (calculated)

5.021

GRAVY (calculated)

-0.401

Length

78 amino acids

Sequence
(BLAST)

1: MSKPADQPPP SDMEVDAAAE EKPLVRFSIN VLELMREAQM QHGLRHGDYT RYRCALPDFL PDLSTISPLR PPVLDRIV

Best Arabidopsis Sequence Match ( AT5G61970.1 )
(BLAST)

001: MGKKQSEISA MEIDDPKSES SDQILPRFSI NVLQLMKSSQ AQHGLRHGDY ARYRRYCSAR LRRLYKSLKF THGRGKYTRR AILESTVTDV RFLHVVFYMA
101: ERAWSHAMEK RQLPDGPNAR QRIYLVGRLR KAVKWASLFS SLCSIKTDSR TSLEAEAYAS YMKGTLLFEQ DQNWETGLAC FKNARAVYEE LGKYGDLENQ
201: VLCRERVEEL EPSIRYCLHK IGKSNLQTSE LLQIGEMEGP ALDLFKAKIE AAMEEARSQQ AASLTEFSWL GYRFPVSNPK SRVSILKAQE LEKELQSPTA
301: ESLPAEKKLT IFDKLFTAYH DARNTIRSDL VSAGNAESVK DDLNGLDKAV GAVLGQRTIE RNQLLVKVAK SKLNRKRDDK NDKVTRPEEL VRLYDLLLQN
401: VADLSDLISS GRDRKPEEIA FEEECQRTSL AFRAERCFYL AKSYSLAGKR AEAFALYSRA RSLAEDALNK FQSIAKKDEG TIQELKTLIK ECRANSCIEH
501: ATGIMEEERA PENLSNRMST ISLNNTAAQV EEKYLLDKLD VYESAVGDSN TKTAPKIERF PPALQSIPRN PIVLDLAYNC IDFPVIENRM KKKGGFFSSR
601: ISSLW

Arabidopsis Description

Signal recognition particle subunit SRP68 [Source:UniProtKB/TrEMBL;Acc:Q9FH46]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.