Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0130100-01 | Rice | cytosol, nucleus | 76.92 | 95.74 |
| TraesCS4B01G128200.1 | Wheat | nucleus | 68.55 | 68.9 |
| TraesCS4A01G188700.1 | Wheat | nucleus | 68.21 | 68.67 |
| TraesCS4D01G124400.1 | Wheat | nucleus | 67.35 | 67.81 |
| HORVU4Hr1G026870.2 | Barley | nucleus | 67.35 | 67.35 |
| TraesCS5D01G150900.1 | Wheat | nucleus | 67.35 | 66.55 |
| TraesCS5B01G139700.1 | Wheat | nucleus | 67.18 | 66.16 |
| TraesCS5A01G141400.1 | Wheat | nucleus | 66.84 | 65.82 |
| Zm00001d005012_P002 | Maize | nucleus, plastid | 46.84 | 64.78 |
| EES16544 | Sorghum | nucleus | 65.13 | 64.69 |
| Zm00001d044657_P002 | Maize | nucleus | 64.79 | 64.68 |
| Zm00001d005013_P001 | Maize | nucleus, plastid | 47.35 | 62.39 |
| EES09184 | Sorghum | nucleus | 62.22 | 61.49 |
| HORVU0Hr1G010590.1 | Barley | cytosol | 65.81 | 61.21 |
| Zm00001d052407_P004 | Maize | nucleus | 59.83 | 56.54 |
| Zm00001d023272_P009 | Maize | nucleus | 57.27 | 55.37 |
| GSMUA_Achr11P... | Banana | cytosol | 43.08 | 47.55 |
| GSMUA_Achr4P02300_001 | Banana | nucleus | 43.93 | 46.14 |
| KRH64929 | Soybean | nucleus | 37.95 | 42.45 |
| KRG94958 | Soybean | nucleus | 37.44 | 41.56 |
| KRH57843 | Soybean | mitochondrion | 36.07 | 40.04 |
| Solyc11g012740.1.1 | Tomato | nucleus | 32.99 | 36.42 |
| Os04t0636700-01 | Rice | nucleus | 32.65 | 36.17 |
| VIT_08s0056g00770.t01 | Wine grape | cytosol | 37.95 | 33.23 |
| Os01t0925000-02 | Rice | nucleus | 22.22 | 26.53 |
Protein Annotations
| Gene3D:1.25.40.90 | MapMan:35.2 | EntrezGene:4351389 | ProteinID:ABA96357.2 | ProteinID:BAF29070.1 | ProteinID:BAT15704.1 |
| InterPro:CID_dom | ncoils:Coil | ProteinID:EEE52690.1 | InterPro:ENTH_VHS | InterPro:IPR006569 | InterPro:IPR008942 |
| EnsemblPlantsGene:Os12g0126800 | EnsemblPlants:Os12t0126800-01 | PFAM:PF04818 | PFscan:PS51391 | PANTHER:PTHR12460 | PANTHER:PTHR12460:SF9 |
| UniProt:Q2QYA2 | InterPro:RNA_pol_II-bd | SMART:SM00582 | SUPFAM:SSF48464 | UniParc:UPI0000D89BF7 | RefSeq:XP_015619977.1 |
| SEG:seg | : | : | : | : | : |
Description
Protein of unknown function DUF618 domain containing protein. (Os12t0126800-01)
Coordinates
chr12:-:1292685..1300940
Molecular Weight (calculated)
62359.0 Da
IEP (calculated)
9.767
GRAVY (calculated)
-0.471
Length
585 amino acids
Sequence
(BLAST)
(BLAST)
001: MADTKAEAKA ETIGGGGGGS GSFSEQAFVE KLNKLNNTAT RIQTLSNWCI FHRKRARKVV DTWEKQYNSA NKDKKVSFLY LSNDILQNSK RKGGEFVNEF
101: WRVLPGLLKD FYVNGGEDGK KVVGRLIDIW DERKVFGTRI ESLKNDILGG STHTMGNNVN SSNPSPNPSS VSKAARKDSG TVTRKLTVGG MPEKIVTAYQ
201: SVLDQHFDED TALNKCNNAV SVLDRMDKDV DDACTQGIQQ GSSLISDLQG QETVLKQCIE QLESVNMARI TLINKLRKAL GEQEAKSELL RNQLLVARAK
301: AEHAMQLKQR LGSALNNGAG SSSSPLMVTL PPGQTAAMMQ NSAAMPIFPQ FQPLHPATSL PATSSAVGDE PKKTAAAMAD KLASLSAPEK VLSSIFSSLA
401: AEQARNSGST SGDLSAGPPG FESNKKPRLD NPIHASDMSA PPFFGQLPQV QPQIGATAAL GGTQPPTQAN QAAGSFPPPP PPLPLMPQFV QNTGGMFGMG
501: PFGMVSGSAP PPPPLPNIMS AGFPRLSVPP PLPLPTQSQN QSQPQQQQSP QAPQQSPTST GFFQPPGAGF FPPVQVQQSP SAQRQ
101: WRVLPGLLKD FYVNGGEDGK KVVGRLIDIW DERKVFGTRI ESLKNDILGG STHTMGNNVN SSNPSPNPSS VSKAARKDSG TVTRKLTVGG MPEKIVTAYQ
201: SVLDQHFDED TALNKCNNAV SVLDRMDKDV DDACTQGIQQ GSSLISDLQG QETVLKQCIE QLESVNMARI TLINKLRKAL GEQEAKSELL RNQLLVARAK
301: AEHAMQLKQR LGSALNNGAG SSSSPLMVTL PPGQTAAMMQ NSAAMPIFPQ FQPLHPATSL PATSSAVGDE PKKTAAAMAD KLASLSAPEK VLSSIFSSLA
401: AEQARNSGST SGDLSAGPPG FESNKKPRLD NPIHASDMSA PPFFGQLPQV QPQIGATAAL GGTQPPTQAN QAAGSFPPPP PPLPLMPQFV QNTGGMFGMG
501: PFGMVSGSAP PPPPLPNIMS AGFPRLSVPP PLPLPTQSQN QSQPQQQQSP QAPQQSPTST GFFQPPGAGF FPPVQVQQSP SAQRQ
001: MSSPFSEEIL IDNLAKLNST QQSIQTLSQW CIVHRSEAEL VVTTWEKQFH STQIGQKVPL LYLANDILQN SKRQGNEFVQ EFWKVLPGAL KDIVSLGDDY
101: GKGVVSRLVN IWEERRVFGS RSKSLKDVML SEEAPPPLDV SKKRFRGSKS AKRDSKSTKT KLSSGGVSEK IVSAFNLVRA ENSNEETEMN KCKSAVRRIR
201: KMEKDVEDAC STAKDPRKES LAKELEEEEN ILRQSVEKLK SVEESRTSLV NHLREALREQ ESELENLQSQ IQVAQEQTEE AQNMQKRLNN ETPVNNNNGT
301: SGQSAKITPA SIAAMAEMLT SSTNSSMIMH SVLSSFAAEA TQTSGLTKSN TSDTNAFVVP PNPQQYHIIP NPAASQQFPY GFGNIPLMPP GALPPPPPGT
401: LPPHMMNNNN QPNAAQQQAQ QGQSFHPPGM MYFGPPHHS
101: GKGVVSRLVN IWEERRVFGS RSKSLKDVML SEEAPPPLDV SKKRFRGSKS AKRDSKSTKT KLSSGGVSEK IVSAFNLVRA ENSNEETEMN KCKSAVRRIR
201: KMEKDVEDAC STAKDPRKES LAKELEEEEN ILRQSVEKLK SVEESRTSLV NHLREALREQ ESELENLQSQ IQVAQEQTEE AQNMQKRLNN ETPVNNNNGT
301: SGQSAKITPA SIAAMAEMLT SSTNSSMIMH SVLSSFAAEA TQTSGLTKSN TSDTNAFVVP PNPQQYHIIP NPAASQQFPY GFGNIPLMPP GALPPPPPGT
401: LPPHMMNNNN QPNAAQQQAQ QGQSFHPPGM MYFGPPHHS
Arabidopsis Description
ENTH/VHS family protein [Source:UniProtKB/TrEMBL;Acc:Q9FJP7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.