Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH64929 | Soybean | nucleus | 86.72 | 87.38 |
| KRH57843 | Soybean | mitochondrion | 66.41 | 66.41 |
| Solyc11g012740.1.1 | Tomato | nucleus | 50.28 | 50.0 |
| GSMUA_Achr11P... | Banana | cytosol | 49.72 | 49.43 |
| VIT_08s0056g00770.t01 | Wine grape | cytosol | 60.91 | 48.05 |
| GSMUA_Achr4P02300_001 | Banana | nucleus | 50.28 | 47.58 |
| KRG97617 | Soybean | mitochondrion | 24.48 | 39.33 |
| KRH43251 | Soybean | nucleus | 37.57 | 38.9 |
| HORVU4Hr1G026870.2 | Barley | nucleus | 42.88 | 38.63 |
| KRH59408 | Soybean | nucleus | 35.29 | 38.51 |
| TraesCS4B01G128200.1 | Wheat | nucleus | 42.13 | 38.14 |
| TraesCS5A01G141400.1 | Wheat | nucleus | 42.88 | 38.05 |
| TraesCS4A01G188700.1 | Wheat | nucleus | 41.94 | 38.04 |
| TraesCS4D01G124400.1 | Wheat | nucleus | 41.75 | 37.87 |
| TraesCS5D01G150900.1 | Wheat | nucleus | 42.31 | 37.67 |
| Os12t0126800-01 | Rice | nucleus | 41.56 | 37.44 |
| TraesCS5B01G139700.1 | Wheat | nucleus | 42.13 | 37.37 |
| EES16544 | Sorghum | nucleus | 40.42 | 36.16 |
| EES09184 | Sorghum | nucleus | 40.61 | 36.15 |
| KRG94593 | Soybean | nucleus | 35.48 | 35.82 |
| HORVU0Hr1G010590.1 | Barley | cytosol | 42.69 | 35.77 |
| Zm00001d044657_P002 | Maize | nucleus | 39.66 | 35.67 |
| Os11t0130100-01 | Rice | cytosol, nucleus | 31.31 | 35.11 |
| KRH06897 | Soybean | nucleus | 34.54 | 34.67 |
| KRH31254 | Soybean | nucleus | 36.24 | 34.6 |
| Zm00001d052407_P004 | Maize | nucleus | 39.47 | 33.6 |
| Zm00001d023272_P009 | Maize | nucleus | 38.14 | 33.22 |
| Zm00001d005012_P002 | Maize | nucleus, plastid | 25.43 | 31.68 |
| Zm00001d005013_P001 | Maize | nucleus, plastid | 26.19 | 31.08 |
Protein Annotations
| Gene3D:1.25.40.90 | EntrezGene:100800067 | MapMan:35.2 | EMBL:ACUP02012067 | InterPro:CID_dom | ncoils:Coil |
| InterPro:ENTH_VHS | EnsemblPlantsGene:GLYMA_19G121100 | InterPro:IPR006569 | InterPro:IPR008942 | UniProt:K7MXZ9 | EnsemblPlants:KRG94958 |
| ProteinID:KRG94958 | ProteinID:KRG94958.1 | ProteinID:KRG94959.1 | ProteinID:KRG94960.1 | ProteinID:KRG94961.1 | PFAM:PF04818 |
| PFscan:PS51391 | PANTHER:PTHR12460 | PANTHER:PTHR12460:SF9 | InterPro:RNA_pol_II-bd | SMART:SM00582 | SUPFAM:SSF48464 |
| UniParc:UPI000295E627 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:37911818..37936225
Molecular Weight (calculated)
57533.1 Da
IEP (calculated)
8.108
GRAVY (calculated)
-0.504
Length
527 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNNIFDGQL LAEKLLKLNN SQQSIESLSH WCISHRKRAK EIVETWDKLF NASQKEQRIS FLYLANDILQ NSRRKGSEFV NEFWKVLPAA LRHVYESGDE
101: NGRKAVTRLV DIWEERKVFG SRGQGLKDDV MGKNPLPSAS NGKSSNSIKT VKRDAHSVRI KLAVGCLPEK ILTAFQPVLD EHLNEKDALN NCSAAVREVG
201: KVVEDVENTL AHGNQLESTL VNDLQEQEKK LKQYMEQLEN GEAARASLLS QLKHALQEQE SRQELVHTQL LVARGQIEKV VGIRKQLNQA AEATDPSQPT
301: SVQSSVSYAP FQTTEDDNKK AAAAAVAAKL AASASSAQML TSVLSSLVAE EAASLNGSLN STGFSSVLPI FNPEKRPKLE KPTPAHDVSN YDMANSPFYA
401: TMQQPPVPNV PLTLPVGMQT VSQANQLQVA FASPPPPLPH SSAYQQSNQY VQSTGLMAGG IPYGYGSNSL PPPPPPPLPP HVTIGLSMPG PQPAQQQQQS
501: PPGFYRPPGI GFYGQSHLST PPPVPRQ
101: NGRKAVTRLV DIWEERKVFG SRGQGLKDDV MGKNPLPSAS NGKSSNSIKT VKRDAHSVRI KLAVGCLPEK ILTAFQPVLD EHLNEKDALN NCSAAVREVG
201: KVVEDVENTL AHGNQLESTL VNDLQEQEKK LKQYMEQLEN GEAARASLLS QLKHALQEQE SRQELVHTQL LVARGQIEKV VGIRKQLNQA AEATDPSQPT
301: SVQSSVSYAP FQTTEDDNKK AAAAAVAAKL AASASSAQML TSVLSSLVAE EAASLNGSLN STGFSSVLPI FNPEKRPKLE KPTPAHDVSN YDMANSPFYA
401: TMQQPPVPNV PLTLPVGMQT VSQANQLQVA FASPPPPLPH SSAYQQSNQY VQSTGLMAGG IPYGYGSNSL PPPPPPPLPP HVTIGLSMPG PQPAQQQQQS
501: PPGFYRPPGI GFYGQSHLST PPPVPRQ
001: MGSSFNAQIL VEKLAKLNNS QASIETLSHW CIFHMNKAKH VVETWGRQFH CAPREQRLAY LYLANDILQN SRRKGSEFVG EFWKVLPDAL RDMIENGDDF
101: GRKSARRLVN IWEERKVFGS RGQILKEELL GRQPENGTRN GNLVPLKLSV PQRQVNGSTL EKVVSAVEVL HGVQIDEDAL VGKSTNAAGY LEKATQEVER
201: DLSSGHAPGP AVVKELQGQH VILRDCIEQL GAMETSRTSL ISHLREALQE QELKLEQVRN HLQIARFQSD RTGDLCRQLL DHGGSSQPPA TEEEESKEVI
301: KVSSTAAAPQ SFTHSDVEQS APVMFASNPT QSLEDPRKTA AAAVVAKLTA STSSAEMLSY VLSSLASEGI IGNNNPPAVT ETLSSVDFPP EKRPKLQNHD
401: QSYLSPHHQN TATTSSSTPP QPLPPPPPFQ LQPQFLQPLQ PPGPVNHTPF NYTIATSTAT TQQQQQEQGP WVPGLTQLST TSAPSENSYQ KFQGQDGFYG
501: INSSVPITPV TRQ
101: GRKSARRLVN IWEERKVFGS RGQILKEELL GRQPENGTRN GNLVPLKLSV PQRQVNGSTL EKVVSAVEVL HGVQIDEDAL VGKSTNAAGY LEKATQEVER
201: DLSSGHAPGP AVVKELQGQH VILRDCIEQL GAMETSRTSL ISHLREALQE QELKLEQVRN HLQIARFQSD RTGDLCRQLL DHGGSSQPPA TEEEESKEVI
301: KVSSTAAAPQ SFTHSDVEQS APVMFASNPT QSLEDPRKTA AAAVVAKLTA STSSAEMLSY VLSSLASEGI IGNNNPPAVT ETLSSVDFPP EKRPKLQNHD
401: QSYLSPHHQN TATTSSSTPP QPLPPPPPFQ LQPQFLQPLQ PPGPVNHTPF NYTIATSTAT TQQQQQEQGP WVPGLTQLST TSAPSENSYQ KFQGQDGFYG
501: INSSVPITPV TRQ
Arabidopsis Description
At3g26990 [Source:UniProtKB/TrEMBL;Acc:Q66GK1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.