Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d005012_P002 | Maize | nucleus, plastid | 55.57 | 81.32 |
| Zm00001d005013_P001 | Maize | nucleus, plastid | 58.32 | 81.31 |
| EES09184 | Sorghum | nucleus | 73.18 | 76.52 |
| Zm00001d044657_P002 | Maize | nucleus | 61.87 | 65.36 |
| TraesCS4D01G124400.1 | Wheat | nucleus | 58.0 | 61.79 |
| TraesCS4B01G128200.1 | Wheat | nucleus | 58.0 | 61.68 |
| HORVU4Hr1G026870.2 | Barley | nucleus | 58.0 | 61.37 |
| TraesCS4A01G188700.1 | Wheat | nucleus | 57.35 | 61.1 |
| Os11t0130100-01 | Rice | cytosol, nucleus | 45.56 | 60.0 |
| Os12t0126800-01 | Rice | nucleus | 56.54 | 59.83 |
| TraesCS5D01G150900.1 | Wheat | nucleus | 55.57 | 58.11 |
| TraesCS5A01G141400.1 | Wheat | nucleus | 55.25 | 57.58 |
| TraesCS5B01G139700.1 | Wheat | nucleus | 55.09 | 57.41 |
| Zm00001d023272_P009 | Maize | nucleus | 54.77 | 56.03 |
| HORVU0Hr1G010590.1 | Barley | cytosol | 54.12 | 53.26 |
| GSMUA_Achr11P... | Banana | cytosol | 37.16 | 43.4 |
| GSMUA_Achr4P02300_001 | Banana | nucleus | 38.61 | 42.91 |
| KRH64929 | Soybean | nucleus | 33.6 | 39.77 |
| KRG94958 | Soybean | nucleus | 33.6 | 39.47 |
| Solyc11g012740.1.1 | Tomato | nucleus | 31.02 | 36.23 |
| KRH57843 | Soybean | mitochondrion | 30.69 | 36.05 |
| VIT_08s0056g00770.t01 | Wine grape | cytosol | 35.38 | 32.78 |
| Zm00001d002140_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 29.08 | 31.3 |
| Zm00001d011975_P002 | Maize | nucleus | 20.19 | 24.51 |
| Zm00001d042291_P002 | Maize | mitochondrion, nucleus | 13.57 | 18.96 |
Protein Annotations
| EnsemblPlants:Zm00001d052407_P004 | EnsemblPlants:Zm00001d052407_T004 | EnsemblPlantsGene:Zm00001d052407 | EntrezGene:100278822 | Gene3D:1.25.40.90 | InterPro:CID_dom |
| InterPro:ENTH_VHS | InterPro:IPR006569 | InterPro:IPR008942 | InterPro:RNA_pol_II-bd | ncoils:Coil | PANTHER:PTHR12460 |
| PANTHER:PTHR12460:SF9 | PFAM:PF04818 | PFscan:PS51391 | ProteinID:AQK57155.1 | SEG:seg | SMART:SM00582 |
| SUPFAM:SSF48464 | UniParc:UPI00084510A0 | UniProt:A0A1D6QGZ1 | MapMan:35.2 | : | : |
Description
ENTH/VHS family protein
Coordinates
chr4:-:189217618..189230075
Molecular Weight (calculated)
66249.9 Da
IEP (calculated)
9.890
GRAVY (calculated)
-0.479
Length
619 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAKADVDA ETGDGGSFSE QRLIDKLKRL NNSAASIQTL SRWCIFHRKK AKRVVDTWEK QFTSAREDKK ISFLYLSNDI LQNSKRKGAD YVDEFWRVLP
101: RSLKHVYEKG GGEGKNQVAR LISIWDDRKV FGTRIESMKN GILGDNPPIL DNNGNSLNPS SNPTSNSKAA RKDSGTIVKK LTVGGMPEKI VSAYQLVLDQ
201: HFDEDTALNK CKTTLGLLER INKDINDSII NGNQPALSLI SDLQEQEMTL KHCIKQLESV DMARISLVNQ LKEALNEQES KSLVLRDQLQ GRGNGSPGLP
301: LLMEAPVRTR STQHLRACVS HAVNSQESRT ISVAQTEAQR VIQLRKQLGG ALVTSVTHST SSPLMITPPE QTSAIMQGSE VRSTHPQSQP LNPAASLPPT
401: VSAVGDESKR TAAAMADKLA SLSAPVQVLT SILSSFAAEQ AASINGGSSS GEFSGGPPGF HIDKRPRLEK TGQASDMGAP PPFFGQAAQV QQQIGGTHPP
501: APAPGSFPPP PPPLPSLLPP LLQQFGQNTG GMIGMGGPFG MMAGSMPPPP PLSNILPAGF PRPSGPPPPP PLPPAQSQPQ QQSPQAAQQS PTSTGFFQSS
601: GMGFFPPAQV QQSPSAQRQ
101: RSLKHVYEKG GGEGKNQVAR LISIWDDRKV FGTRIESMKN GILGDNPPIL DNNGNSLNPS SNPTSNSKAA RKDSGTIVKK LTVGGMPEKI VSAYQLVLDQ
201: HFDEDTALNK CKTTLGLLER INKDINDSII NGNQPALSLI SDLQEQEMTL KHCIKQLESV DMARISLVNQ LKEALNEQES KSLVLRDQLQ GRGNGSPGLP
301: LLMEAPVRTR STQHLRACVS HAVNSQESRT ISVAQTEAQR VIQLRKQLGG ALVTSVTHST SSPLMITPPE QTSAIMQGSE VRSTHPQSQP LNPAASLPPT
401: VSAVGDESKR TAAAMADKLA SLSAPVQVLT SILSSFAAEQ AASINGGSSS GEFSGGPPGF HIDKRPRLEK TGQASDMGAP PPFFGQAAQV QQQIGGTHPP
501: APAPGSFPPP PPPLPSLLPP LLQQFGQNTG GMIGMGGPFG MMAGSMPPPP PLSNILPAGF PRPSGPPPPP PLPPAQSQPQ QQSPQAAQQS PTSTGFFQSS
601: GMGFFPPAQV QQSPSAQRQ
001: MGSSFNAQIL VEKLAKLNNS QASIETLSHW CIFHMNKAKH VVETWGRQFH CAPREQRLAY LYLANDILQN SRRKGSEFVG EFWKVLPDAL RDMIENGDDF
101: GRKSARRLVN IWEERKVFGS RGQILKEELL GRQPENGTRN GNLVPLKLSV PQRQVNGSTL EKVVSAVEVL HGVQIDEDAL VGKSTNAAGY LEKATQEVER
201: DLSSGHAPGP AVVKELQGQH VILRDCIEQL GAMETSRTSL ISHLREALQE QELKLEQVRN HLQIARFQSD RTGDLCRQLL DHGGSSQPPA TEEEESKEVI
301: KVSSTAAAPQ SFTHSDVEQS APVMFASNPT QSLEDPRKTA AAAVVAKLTA STSSAEMLSY VLSSLASEGI IGNNNPPAVT ETLSSVDFPP EKRPKLQNHD
401: QSYLSPHHQN TATTSSSTPP QPLPPPPPFQ LQPQFLQPLQ PPGPVNHTPF NYTIATSTAT TQQQQQEQGP WVPGLTQLST TSAPSENSYQ KFQGQDGFYG
501: INSSVPITPV TRQ
101: GRKSARRLVN IWEERKVFGS RGQILKEELL GRQPENGTRN GNLVPLKLSV PQRQVNGSTL EKVVSAVEVL HGVQIDEDAL VGKSTNAAGY LEKATQEVER
201: DLSSGHAPGP AVVKELQGQH VILRDCIEQL GAMETSRTSL ISHLREALQE QELKLEQVRN HLQIARFQSD RTGDLCRQLL DHGGSSQPPA TEEEESKEVI
301: KVSSTAAAPQ SFTHSDVEQS APVMFASNPT QSLEDPRKTA AAAVVAKLTA STSSAEMLSY VLSSLASEGI IGNNNPPAVT ETLSSVDFPP EKRPKLQNHD
401: QSYLSPHHQN TATTSSSTPP QPLPPPPPFQ LQPQFLQPLQ PPGPVNHTPF NYTIATSTAT TQQQQQEQGP WVPGLTQLST TSAPSENSYQ KFQGQDGFYG
501: INSSVPITPV TRQ
Arabidopsis Description
At3g26990 [Source:UniProtKB/TrEMBL;Acc:Q66GK1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.