Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES16544 | Sorghum | nucleus | 86.18 | 85.74 |
| Zm00001d023272_P009 | Maize | nucleus | 77.3 | 74.88 |
| Zm00001d005012_P002 | Maize | nucleus, plastid | 49.49 | 68.56 |
| Zm00001d005013_P001 | Maize | nucleus, plastid | 51.37 | 67.79 |
| TraesCS4B01G128200.1 | Wheat | nucleus | 64.51 | 64.95 |
| Os12t0126800-01 | Rice | nucleus | 64.68 | 64.79 |
| TraesCS4A01G188700.1 | Wheat | nucleus | 64.16 | 64.72 |
| Os11t0130100-01 | Rice | cytosol, nucleus | 51.54 | 64.26 |
| HORVU4Hr1G026870.2 | Barley | nucleus | 63.65 | 63.76 |
| TraesCS5D01G150900.1 | Wheat | nucleus | 64.16 | 63.51 |
| TraesCS4D01G124400.1 | Wheat | nucleus | 62.63 | 63.17 |
| TraesCS5A01G141400.1 | Wheat | nucleus | 62.8 | 61.95 |
| Zm00001d052407_P004 | Maize | nucleus | 65.36 | 61.87 |
| TraesCS5B01G139700.1 | Wheat | nucleus | 62.29 | 61.45 |
| HORVU0Hr1G010590.1 | Barley | cytosol | 62.29 | 58.03 |
| GSMUA_Achr11P... | Banana | cytosol | 41.3 | 45.66 |
| GSMUA_Achr4P02300_001 | Banana | nucleus | 41.81 | 43.99 |
| KRH64929 | Soybean | nucleus | 35.67 | 39.96 |
| KRG94958 | Soybean | nucleus | 35.67 | 39.66 |
| KRH57843 | Soybean | mitochondrion | 32.94 | 36.62 |
| Solyc11g012740.1.1 | Tomato | nucleus | 32.94 | 36.42 |
| VIT_08s0056g00770.t01 | Wine grape | cytosol | 38.4 | 33.68 |
| Zm00001d002140_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 30.38 | 30.96 |
| Zm00001d011975_P002 | Maize | nucleus | 20.48 | 23.53 |
| Zm00001d042291_P002 | Maize | mitochondrion, nucleus | 14.68 | 19.41 |
Protein Annotations
| EnsemblPlants:Zm00001d044657_P002 | EnsemblPlants:Zm00001d044657_T002 | EnsemblPlantsGene:Zm00001d044657 | EntrezGene:103651671 | Gene3D:1.25.40.90 | InterPro:CID_dom |
| InterPro:ENTH_VHS | InterPro:IPR006569 | InterPro:IPR008942 | InterPro:RNA_pol_II-bd | ncoils:Coil | PANTHER:PTHR12460 |
| PANTHER:PTHR12460:SF9 | PFAM:PF04818 | PFscan:PS51391 | ProteinID:ONM42199.1 | ProteinID:ONM42200.1 | SEG:seg |
| SMART:SM00582 | SUPFAM:SSF48464 | UniParc:UPI000220CF02 | UniProt:A0A1D6NQJ4 | MapMan:35.2 | : |
Description
ENTH/VHS family protein
Coordinates
chr3:+:234224137..234238691
Molecular Weight (calculated)
63053.0 Da
IEP (calculated)
9.450
GRAVY (calculated)
-0.441
Length
586 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGAKAGVDV ETRDGGAGGS FSEERLVDKL NKLNNTAASI QTLSQWCIFH RKRARRVVDT WEKQFSSATK DKKISFLFLS NDILQNSKRK GGDYVHEFWR
101: VLPRSLKHVY ENGGEDGKKL VARLIGIWDE RKVFGTRIES LKYSIFGDNP PIFDNNGNKN NSNPGSNPLN SKVARKDSST VLKKLTVGGM PEKIVTAYQS
201: VLDQHFDEDT VLNKCKSTVS VLEKIKKDIE DASTKGDQPA STMISDLPEQ ETILKQCIAQ LESVYVVRIL LINQLKEALV EQESKSEVLR SQLQVARSEA
301: EHAIQLRQRF DGAVVSNGTG SNSSLLMITP TEQTAAMIQG SGVRLTSPQL QSLNPATSLA PTVSAVGDEP KRTAAAMADK LTSLSAPVQV LSSIFSSFVA
401: EHGASLSSKN SGPASGELSG EPPGFQIEKR PRLEKTVQAS DMGAPPFPVQ VPQLQQQTGA APTQLPTQIN QAPGPFAPPL PSLLPPFLQQ FGQSTGGMMG
501: VGPFGMMSGS MPPPPPLPNI MPAGFPGPSG PPPPPLPPAQ NQPQQQQQSP QAPQQSPTSA GFFQSSAGMG FFPPVQVQQS PSAQRQ
101: VLPRSLKHVY ENGGEDGKKL VARLIGIWDE RKVFGTRIES LKYSIFGDNP PIFDNNGNKN NSNPGSNPLN SKVARKDSST VLKKLTVGGM PEKIVTAYQS
201: VLDQHFDEDT VLNKCKSTVS VLEKIKKDIE DASTKGDQPA STMISDLPEQ ETILKQCIAQ LESVYVVRIL LINQLKEALV EQESKSEVLR SQLQVARSEA
301: EHAIQLRQRF DGAVVSNGTG SNSSLLMITP TEQTAAMIQG SGVRLTSPQL QSLNPATSLA PTVSAVGDEP KRTAAAMADK LTSLSAPVQV LSSIFSSFVA
401: EHGASLSSKN SGPASGELSG EPPGFQIEKR PRLEKTVQAS DMGAPPFPVQ VPQLQQQTGA APTQLPTQIN QAPGPFAPPL PSLLPPFLQQ FGQSTGGMMG
501: VGPFGMMSGS MPPPPPLPNI MPAGFPGPSG PPPPPLPPAQ NQPQQQQQSP QAPQQSPTSA GFFQSSAGMG FFPPVQVQQS PSAQRQ
001: MSSPFSEEIL IDNLAKLNST QQSIQTLSQW CIVHRSEAEL VVTTWEKQFH STQIGQKVPL LYLANDILQN SKRQGNEFVQ EFWKVLPGAL KDIVSLGDDY
101: GKGVVSRLVN IWEERRVFGS RSKSLKDVML SEEAPPPLDV SKKRFRGSKS AKRDSKSTKT KLSSGGVSEK IVSAFNLVRA ENSNEETEMN KCKSAVRRIR
201: KMEKDVEDAC STAKDPRKES LAKELEEEEN ILRQSVEKLK SVEESRTSLV NHLREALREQ ESELENLQSQ IQVAQEQTEE AQNMQKRLNN ETPVNNNNGT
301: SGQSAKITPA SIAAMAEMLT SSTNSSMIMH SVLSSFAAEA TQTSGLTKSN TSDTNAFVVP PNPQQYHIIP NPAASQQFPY GFGNIPLMPP GALPPPPPGT
401: LPPHMMNNNN QPNAAQQQAQ QGQSFHPPGM MYFGPPHHS
101: GKGVVSRLVN IWEERRVFGS RSKSLKDVML SEEAPPPLDV SKKRFRGSKS AKRDSKSTKT KLSSGGVSEK IVSAFNLVRA ENSNEETEMN KCKSAVRRIR
201: KMEKDVEDAC STAKDPRKES LAKELEEEEN ILRQSVEKLK SVEESRTSLV NHLREALREQ ESELENLQSQ IQVAQEQTEE AQNMQKRLNN ETPVNNNNGT
301: SGQSAKITPA SIAAMAEMLT SSTNSSMIMH SVLSSFAAEA TQTSGLTKSN TSDTNAFVVP PNPQQYHIIP NPAASQQFPY GFGNIPLMPP GALPPPPPGT
401: LPPHMMNNNN QPNAAQQQAQ QGQSFHPPGM MYFGPPHHS
Arabidopsis Description
ENTH/VHS family protein [Source:UniProtKB/TrEMBL;Acc:Q9FJP7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.