Factsheet for GSMUA_Achr11P10430_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P02300_001	Banana	nucleus	69.25	65.89
GSMUA_Achr8P17800_001	Banana	cytosol	19.81	51.72
GSMUA_Achr4P15940_001	Banana	cytosol	19.06	50.0
KRH64929	Soybean	nucleus	49.25	49.9
KRG94958	Soybean	nucleus	49.43	49.72
Solyc11g012740.1.1	Tomato	nucleus	45.66	45.66
KRH57843	Soybean	mitochondrion	45.09	45.35
TraesCS5B01G139700.1	Wheat	nucleus	48.3	43.1
Os12t0126800-01	Rice	nucleus	47.55	43.08
TraesCS5A01G141400.1	Wheat	nucleus	48.11	42.93
TraesCS5D01G150900.1	Wheat	nucleus	47.92	42.91
HORVU4Hr1G026870.2	Barley	nucleus	46.98	42.56
TraesCS4B01G128200.1	Wheat	nucleus	46.42	42.27
TraesCS4D01G124400.1	Wheat	nucleus	46.23	42.17
Os11t0130100-01	Rice	cytosol, nucleus	37.36	42.13
TraesCS4A01G188700.1	Wheat	nucleus	46.04	42.0
Zm00001d044657_P002	Maize	nucleus	45.66	41.3
EES16544	Sorghum	nucleus	45.47	40.92
HORVU0Hr1G010590.1	Barley	cytosol	47.55	40.06
EES09184	Sorghum	nucleus	44.72	40.03
VIT_08s0056g00770.t01	Wine grape	cytosol	50.38	39.97
Zm00001d023272_P009	Maize	nucleus	43.4	38.02
Zm00001d005013_P001	Maize	nucleus, plastid	31.13	37.16
Zm00001d052407_P004	Maize	nucleus	43.4	37.16
Zm00001d005012_P002	Maize	nucleus, plastid	29.62	37.12
GSMUA_Achr11P...	Banana	nucleus	36.42	37.04
GSMUA_Achr8P24850_001	Banana	cytosol	37.74	36.63
GSMUA_Achr10P...	Banana	nucleus	35.66	36.14
GSMUA_Achr4P09200_001	Banana	nucleus	38.11	35.69

Protein Annotations

EnsemblPlants:GSMUA_Achr11P10430_001	EnsemblPlants:GSMUA_Achr11T10430_001	EnsemblPlantsGene:GSMUA_Achr11G10430_001	Gene3D:1.25.40.90	InterPro:CID_dom	InterPro:ENTH_VHS
InterPro:IPR006569	InterPro:IPR008942	InterPro:RNA_pol_II-bd	ncoils:Coil	PANTHER:PTHR12460	PANTHER:PTHR12460:SF9
PFAM:PF04818	PFscan:PS51391	SEG:seg	SMART:SM00582	SUPFAM:SSF48464	UniParc:UPI000296AE29
UniProt:M0RR23	MapMan:35.2	:	:	:	:

Description

Putative protein of unknown function, DUF618 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G10430_001]

Coordinates

chr11:+:8245159..8259683

Molecular Weight (calculated)

58277.6 Da

IEP (calculated)

8.205

GRAVY (calculated)

-0.425

Length

530 amino acids

Sequence
(BLAST)

001: MSEVFNNQIL VEKLTKLNNS QQSIETLSNW CIFHRKKAKE IVETWDQAFS NSPREKRVPF LYLANDILQN SRRKGSEFVN EFWKVLPGCL KNVYENGEDH
101: GKKVVNRLVE IWDERKVFGS RGRGLKDEIL GNAPILVSDN GKSTNPIKFV RKDANFVRIK LALGEMPEKI VTAYQSVLDD RSNEDTALSN CKISVQVLEK
201: MEKDVDVSCT QGNQQGSPMI DNLQVQETIL KQCIEQLEIA FAARATLVAQ LKEALNEQEL KLELIHNHLQ IAQYQTENTS SMRQRLEPKI SPISITQLAP
301: AQPVTSIARS LSSVEDDHKK AAAAVAAKLA ASSSSAQVLT SILSSLAAEE AASMSNGLSS RVVSNSPNFP LEKRPRLENL MSMADMDKTS YFSQVQQPQQ
401: QQQTVPLVLP QTSAASMQQF SQSNLAPPNI TPPPPPLPPL PPPPMQQYAH GSGATISVTP YGFIGGSLAP PPPLPSNPSL GLTRPGIPPP LPPPPPPPHQ
501: HQQPITVGFY QSPGIGFYGQ AQTAPTVQRQ

Best Arabidopsis Sequence Match ( AT3G26990.1 )
(BLAST)

001: MGSSFNAQIL VEKLAKLNNS QASIETLSHW CIFHMNKAKH VVETWGRQFH CAPREQRLAY LYLANDILQN SRRKGSEFVG EFWKVLPDAL RDMIENGDDF
101: GRKSARRLVN IWEERKVFGS RGQILKEELL GRQPENGTRN GNLVPLKLSV PQRQVNGSTL EKVVSAVEVL HGVQIDEDAL VGKSTNAAGY LEKATQEVER
201: DLSSGHAPGP AVVKELQGQH VILRDCIEQL GAMETSRTSL ISHLREALQE QELKLEQVRN HLQIARFQSD RTGDLCRQLL DHGGSSQPPA TEEEESKEVI
301: KVSSTAAAPQ SFTHSDVEQS APVMFASNPT QSLEDPRKTA AAAVVAKLTA STSSAEMLSY VLSSLASEGI IGNNNPPAVT ETLSSVDFPP EKRPKLQNHD
401: QSYLSPHHQN TATTSSSTPP QPLPPPPPFQ LQPQFLQPLQ PPGPVNHTPF NYTIATSTAT TQQQQQEQGP WVPGLTQLST TSAPSENSYQ KFQGQDGFYG
501: INSSVPITPV TRQ

Arabidopsis Description

At3g26990 [Source:UniProtKB/TrEMBL;Acc:Q66GK1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.