CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64929	Soybean	nucleus	66.79	67.3
KRG94958	Soybean	nucleus	66.41	66.41
Solyc11g012740.1.1	Tomato	nucleus	49.72	49.43
VIT_08s0056g00770.t01	Wine grape	cytosol	57.5	45.36
GSMUA_Achr11P...	Banana	cytosol	45.35	45.09
GSMUA_Achr4P02300_001	Banana	nucleus	45.92	43.45
KRG97617	Soybean	mitochondrion	23.34	37.5
KRH59408	Soybean	nucleus	33.59	36.65
HORVU4Hr1G026870.2	Barley	nucleus	40.04	36.07
Os12t0126800-01	Rice	nucleus	40.04	36.07
TraesCS4D01G124400.1	Wheat	nucleus	39.47	35.8
TraesCS4A01G188700.1	Wheat	nucleus	39.28	35.63
TraesCS4B01G128200.1	Wheat	nucleus	39.28	35.57
Os11t0130100-01	Rice	cytosol, nucleus	31.31	35.11
KRH43251	Soybean	nucleus	33.59	34.77
TraesCS5A01G141400.1	Wheat	nucleus	38.52	34.18
TraesCS5B01G139700.1	Wheat	nucleus	38.52	34.18
EES16544	Sorghum	nucleus	37.95	33.96
KRG94593	Soybean	nucleus	33.59	33.91
TraesCS5D01G150900.1	Wheat	nucleus	37.95	33.78
HORVU0Hr1G010590.1	Barley	cytosol	39.47	33.07
Zm00001d044657_P002	Maize	nucleus	36.62	32.94
KRH06897	Soybean	nucleus	32.64	32.76
EES09184	Sorghum	nucleus	36.43	32.43
KRH31254	Soybean	nucleus	33.78	32.25
Zm00001d023272_P009	Maize	nucleus	36.62	31.9
Zm00001d052407_P004	Maize	nucleus	36.05	30.69
Zm00001d005012_P002	Maize	nucleus, plastid	24.1	30.02
Zm00001d005013_P001	Maize	nucleus, plastid	24.67	29.28

Protein Annotations

EMBL:ACUP02003057	EnsemblPlants:KRH57843	EnsemblPlantsGene:GLYMA_05G087600	Gene3D:1.25.40.90	InterPro:CID_dom	InterPro:ENTH_VHS
InterPro:IPR006569	InterPro:IPR008942	InterPro:RNA_pol_II-bd	ncoils:Coil	PANTHER:PTHR12460	PANTHER:PTHR12460:SF9
PFAM:PF04818	PFscan:PS51391	ProteinID:KRH57843	ProteinID:KRH57843.1	SEG:seg	SMART:SM00582
SUPFAM:SSF48464	UniParc:UPI0006ED73D6	UniProt:A0A0R0JZP3	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr5:+:17917574..17926859

Molecular Weight (calculated)

57277.0 Da

IEP (calculated)

7.722

GRAVY (calculated)

-0.434

Length

527 amino acids

Sequence
(BLAST)

001: MYFLNILSAL SRLCISHRKR AKEIVETWDK LFSSSQKEQC ISFLYLANDI LQNSKRKGGE FVNEFWKVLP AALRRVYDSD EHGKKAVTRL IDIWEERKVF
101: GSRGQGLKDE IMGQNPLPSS TSNGKSSNPI KIVKRDAHSV RLKLAVGCLP EKLLTSLHSV HDEHLNEEFA LNKCNAVVHQ VGKLVEDAEN ILAQGNQLGS
201: TLVNDLQEQE NELKQYMVQL ENAEAARATL LSQLKDALQE QESRQELVHT QLLAAQGQIE QAASIRKRFT VAPEATRALE QNLPSVQPNN TPLQPSFTQP
301: PISFAPPQTT EEDKKAAAAA VAAKLAASTS SALMLTSVLS SLVAEEAASM NGSLNSTGFT SGLPVFRPEK RQKLEKQMHA SEFNSTDMGS SSFLGTLQQP
401: SVANVPLTHS ISLQPIPQPN QSQAAFASGP PPPHSPVNPP ANQFVQSTGL MVGGIPYGYG SNNLPPPPPP PLPPHVAMGL SMAGMQPSQS QAQQQQPSAT
501: GGFYRPPDIG FYGQSHSSTQ PAPVPRQ

Best Arabidopsis Sequence Match ( AT3G26990.1 )
(BLAST)

001: MGSSFNAQIL VEKLAKLNNS QASIETLSHW CIFHMNKAKH VVETWGRQFH CAPREQRLAY LYLANDILQN SRRKGSEFVG EFWKVLPDAL RDMIENGDDF
101: GRKSARRLVN IWEERKVFGS RGQILKEELL GRQPENGTRN GNLVPLKLSV PQRQVNGSTL EKVVSAVEVL HGVQIDEDAL VGKSTNAAGY LEKATQEVER
201: DLSSGHAPGP AVVKELQGQH VILRDCIEQL GAMETSRTSL ISHLREALQE QELKLEQVRN HLQIARFQSD RTGDLCRQLL DHGGSSQPPA TEEEESKEVI
301: KVSSTAAAPQ SFTHSDVEQS APVMFASNPT QSLEDPRKTA AAAVVAKLTA STSSAEMLSY VLSSLASEGI IGNNNPPAVT ETLSSVDFPP EKRPKLQNHD
401: QSYLSPHHQN TATTSSSTPP QPLPPPPPFQ LQPQFLQPLQ PPGPVNHTPF NYTIATSTAT TQQQQQEQGP WVPGLTQLST TSAPSENSYQ KFQGQDGFYG
501: INSSVPITPV TRQ

Arabidopsis Description

At3g26990 [Source:UniProtKB/TrEMBL;Acc:Q66GK1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.