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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • nucleus 3
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc05g050960.2.1 Tomato cytosol 49.13 79.81
KRH65320 Soybean mitochondrion, nucleus 74.57 74.35
CDY68195 Canola cytosol, nucleus, plastid 64.45 73.36
CDY18933 Canola plastid 72.83 72.62
PGSC0003DMT400018063 Potato nucleus 76.3 72.33
GSMUA_Achr5P14000_001 Banana cytosol 60.4 71.09
KXG31586 Sorghum cytosol 57.8 70.92
TraesCS2D01G214900.1 Wheat cytosol 58.96 70.34
TraesCS2A01G208200.1 Wheat cytosol 58.38 69.66
Solyc05g050950.2.1 Tomato plastid 24.57 69.11
Zm00001d044278_P001 Maize cytosol 58.09 68.37
Bra004897.1-P Field mustard nucleus 69.65 65.14
Os01t0578000-01 Rice cytosol 65.32 64.76
TraesCS2B01G234700.3 Wheat cytosol 58.67 64.24
AT2G45280.2 Thale cress nucleus, plastid 71.68 64.08
CDX74725 Canola nucleus 73.12 62.62
HORVU0Hr1G003380.15 Barley cytosol 34.39 48.57
VIT_05s0020g04170.t01 Wine grape nucleus 28.61 28.45
VIT_11s0016g00340.t01 Wine grape cytosol 27.46 28.19
VIT_11s0052g00940.t01 Wine grape cytosol, nucleus, plastid 21.97 25.33
VIT_06s0004g03600.t01 Wine grape cytosol, nucleus, plastid 22.83 21.29
Protein Annotations
EntrezGene:100267711wikigene:100267711MapMan:13.3.6.4.3.1Gene3D:3.40.50.300ProteinID:CBI38899ProteinID:CBI38899.3
UniProt:D7U7X0InterPro:DNA_recomb/repair_Rad51_CInterPro:DNA_recomb/repair_RecA-likeEMBL:FN596739GO:GO:0000003GO:GO:0000150
GO:GO:0000166GO:GO:0000400GO:GO:0000707GO:GO:0000724GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003690GO:GO:0003697GO:GO:0003824GO:GO:0004518GO:GO:0004520
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0005657GO:GO:0006139GO:GO:0006259GO:GO:0006281GO:GO:0006312GO:GO:0006950
GO:GO:0007049GO:GO:0007131GO:GO:0007140GO:GO:0007141GO:GO:0007143GO:GO:0008094
GO:GO:0008150GO:GO:0008152GO:GO:0009628GO:GO:0009987GO:GO:0010212GO:GO:0016043
GO:GO:0016444GO:GO:0016787GO:GO:0033063GO:GO:0042148GO:GO:0045003GO:GO:0051321
InterPro:IPR020588EntrezGene:LOC100267711wikigene:LOC100267711InterPro:P-loop_NTPasePFAM:PF08423PIRSF:PIRSF005856
PFscan:PS50162PANTHER:PTHR22942PANTHER:PTHR22942:SF14InterPro:Rad51_DMC1_RadAInterPro:RecA_ATP-bdSUPFAM:SSF52540
UniParc:UPI00015CA4C2ArrayExpress:VIT_15s0048g00380EnsemblPlantsGene:VIT_15s0048g00380EnsemblPlants:VIT_15s0048g00380.t01RefSeq:XP_002280748RefSeq:XP_002280748.1
SEG:seg:::::
Description
No Description!
Coordinates
chr15:-:14515496..14520400
Molecular Weight (calculated)
38071.9 Da
IEP (calculated)
7.062
GRAVY (calculated)
-0.068
Length
346 amino acids
Sequence
(BLAST)
001: MELARLPISA SQRGKLISAG YTSLSSLSSL SPSTLAQDLK ISDNEALEIL RVVSQGSRLD KPDGSHAIVN GAQTAWDMLH EEESLKCITT SCVDLDDILG
101: GGIKCKEVTE IGGVPGIGKT QLGIQLAVNV QIPVNYGGLG GKAIYIDTEG SFMLERSLQI AEACIEDMSG NSDFLQKDFQ SCQVKAQPKD FLQNIFYFRV
201: CSYTEQIAMI NYLDKFISEH KDVNVVIIDS VTFHFRQDFD DLALRTRLLS GMALKLMKLA KKFSLAVVLL NQVTTKHTEG SFQLTLALGD SWSHSCTNRV
301: ILYWNGDERY AYIDKSPSLR SASAPYSVTG KGIRTATSKC KRIKIM
Best Arabidopsis Sequence Match ( AT2G45280.1 )
(BLAST)
001: MISFGRRKSP AIEETSLATS VMEAWRLPLS PSIRGKLISA GYTCLSSIAS VSSSDLARDA NITEEEAFEI LKLANQSCCN GSRSLINGAK NAWDMLHEEE
101: SLPRITTSCS DLDNILGGGI SCRDVTEIGG VPGIGKTQIG IQLSVNVQIP RECGGLGGKA IYIDTEGSFM VERALQIAEA CVEDMEEYTG YMHKHFQANQ
201: VQMKPEDILE NIFYFRVCSY TEQIALVNHL EKFISENKDV KVVIVDSITF HFRQDYDDLA QRTRVLSEMA LKFMKLAKKF SLAVVLLNQV TTKFSEGSFQ
301: LALALGDSWS HSCTNRVILY WNGDERYAYI DKSPSLPSAS ASYTVTSRGL RNSSSSSKRV KMM
Arabidopsis Description
ATRAD51CRAS associated with diabetes protein 51C [Source:UniProtKB/TrEMBL;Acc:F4IW45]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.