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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus

Predictor Summary:
  • cytosol 1
  • mitochondrion 4
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc05g050960.2.1 Tomato cytosol 46.11 75.12
VIT_15s0048g00380.t01 Wine grape nucleus 74.35 74.57
CDY68195 Canola cytosol, nucleus, plastid 64.84 74.01
CDY18933 Canola plastid 71.47 71.47
GSMUA_Achr5P14000_001 Banana cytosol 58.79 69.39
KXG31586 Sorghum cytosol 54.47 67.02
TraesCS2D01G214900.1 Wheat cytosol 55.04 65.86
TraesCS2A01G208200.1 Wheat cytosol 54.76 65.52
PGSC0003DMT400018063 Potato nucleus 68.88 65.48
Zm00001d044278_P001 Maize cytosol 54.76 64.63
Os01t0578000-01 Rice cytosol 64.84 64.47
AT2G45280.2 Thale cress nucleus, plastid 70.89 63.57
Bra004897.1-P Field mustard nucleus 67.72 63.51
CDX74725 Canola nucleus 71.18 61.14
TraesCS2B01G234700.3 Wheat cytosol 54.76 60.13
Solyc05g050950.2.1 Tomato plastid 20.75 58.54
HORVU0Hr1G003380.15 Barley cytosol 33.14 46.94
KRH35438 Soybean nucleus 29.68 29.86
KRH02540 Soybean cytosol 27.67 27.99
KRH19405 Soybean cytosol 27.67 27.91
KRH01614 Soybean nucleus 22.19 26.74
KRH10360 Soybean mitochondrion, nucleus, plastid 23.92 21.96
KRG91377 Soybean cytosol 8.93 21.38
Protein Annotations
Gene3D:1.10.150.20EntrezGene:100527406MapMan:13.3.6.4.3.1Gene3D:3.40.50.300UniProt:A0A0R0KKW8EMBL:ACUP02001328
InterPro:DNA_recomb/repair_Rad51_CInterPro:DNA_recomb/repair_RecA-likeInterPro:DNA_repair_Rad51/TF_NusA_a-hlxEnsemblPlantsGene:GLYMA_03G027600GO:GO:0000003GO:GO:0000150
GO:GO:0000166GO:GO:0000400GO:GO:0000707GO:GO:0000724GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003690GO:GO:0003697GO:GO:0003824GO:GO:0004518GO:GO:0004520
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0005657GO:GO:0006139GO:GO:0006259GO:GO:0006281GO:GO:0006312GO:GO:0006950
GO:GO:0007049GO:GO:0007131GO:GO:0007140GO:GO:0007141GO:GO:0007143GO:GO:0008094
GO:GO:0008150GO:GO:0008152GO:GO:0009628GO:GO:0009987GO:GO:0010212GO:GO:0016043
GO:GO:0016444GO:GO:0016787GO:GO:0033063GO:GO:0042148GO:GO:0045003GO:GO:0051321
InterPro:IPR020588EnsemblPlants:KRH65320ProteinID:KRH65320ProteinID:KRH65320.1InterPro:P-loop_NTPasePFAM:PF08423
PIRSF:PIRSF005856PFscan:PS50162PANTHER:PTHR22942PANTHER:PTHR22942:SF14InterPro:Rad51_DMC1_RadAInterPro:RecA_ATP-bd
SUPFAM:SSF47794SUPFAM:SSF52540UniParc:UPI000549FF06SEG:seg::
Description
hypothetical protein
Coordinates
chr3:-:3029475..3033087
Molecular Weight (calculated)
38450.4 Da
IEP (calculated)
7.236
GRAVY (calculated)
-0.096
Length
347 amino acids
Sequence
(BLAST)
001: MEVGMLPISA SKRGKLLAAG YTTLDAIARA SPTHLARDID VSESEATEIL NLASKPSALE RPNGSHTAVV GGGQTAWDML NDEKFSSYIT TSCADLDNIL
101: GGGIKCKEVT EIGGVPGIGK TQIGIQLAVN VQIPQEYGGL GGKAIYIDTE GSFMVERVLQ IAEACIEDMA EYSRHFHKDF QACDVKMHPN NILENIFYFR
201: VCSYTEQIAL INYLDKFITE NKDVKILIVD SVTFHFRQDF DDMALRTRLL SEMALKLMKL AKKFRLAVVM FNQVTTKHIE GSFQLTLALG DSWSHSCTNR
301: IILFWNGNER HAFIDKSPSL KSASAPYSVT TRGIRNSTSS CKRIKMM
Best Arabidopsis Sequence Match ( AT2G45280.1 )
(BLAST)
001: MISFGRRKSP AIEETSLATS VMEAWRLPLS PSIRGKLISA GYTCLSSIAS VSSSDLARDA NITEEEAFEI LKLANQSCCN GSRSLINGAK NAWDMLHEEE
101: SLPRITTSCS DLDNILGGGI SCRDVTEIGG VPGIGKTQIG IQLSVNVQIP RECGGLGGKA IYIDTEGSFM VERALQIAEA CVEDMEEYTG YMHKHFQANQ
201: VQMKPEDILE NIFYFRVCSY TEQIALVNHL EKFISENKDV KVVIVDSITF HFRQDYDDLA QRTRVLSEMA LKFMKLAKKF SLAVVLLNQV TTKFSEGSFQ
301: LALALGDSWS HSCTNRVILY WNGDERYAYI DKSPSLPSAS ASYTVTSRGL RNSSSSSKRV KMM
Arabidopsis Description
ATRAD51CRAS associated with diabetes protein 51C [Source:UniProtKB/TrEMBL;Acc:F4IW45]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.