Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05380 | Sorghum | mitochondrion | 85.85 | 80.18 |
| Os02t0602000-01 | Rice | mitochondrion | 54.66 | 50.0 |
| GSMUA_Achr9P07790_001 | Banana | nucleus | 42.44 | 42.04 |
| GSMUA_Achr3P17060_001 | Banana | nucleus | 43.09 | 38.84 |
| Zm00001d050790_P003 | Maize | nucleus | 40.51 | 37.17 |
| AT1G67590.1 | Thale cress | nucleus | 39.87 | 35.73 |
| CDY32543 | Canola | nucleus | 40.19 | 35.41 |
| CDY12657 | Canola | cytosol | 39.87 | 35.13 |
| CDY01823 | Canola | nucleus | 39.87 | 35.03 |
| Bra033989.1-P | Field mustard | cytosol | 39.87 | 34.93 |
| VIT_01s0010g02560.t01 | Wine grape | nucleus | 40.19 | 34.82 |
| CDX96080 | Canola | nucleus | 39.55 | 34.65 |
| PGSC0003DMT400044982 | Potato | nucleus | 37.94 | 33.91 |
| Solyc05g014710.2.1 | Tomato | nucleus | 37.94 | 33.71 |
| KRH58742 | Soybean | nucleus | 39.55 | 33.52 |
| KRH42640 | Soybean | nucleus | 37.94 | 32.15 |
| Bra004237.1-P | Field mustard | nucleus | 32.15 | 31.45 |
| Zm00001d034558_P001 | Maize | nucleus | 19.94 | 23.85 |
| Zm00001d006626_P001 | Maize | nucleus | 18.97 | 22.61 |
| Zm00001d021839_P001 | Maize | nucleus | 20.9 | 22.11 |
| Zm00001d027403_P001 | Maize | nucleus | 28.62 | 20.99 |
| Zm00001d048481_P001 | Maize | cytosol, mitochondrion, nucleus | 27.97 | 20.67 |
| Zm00001d041496_P001 | Maize | nucleus | 23.79 | 19.42 |
| Zm00001d054034_P001 | Maize | nucleus | 31.83 | 17.97 |
| Zm00001d002274_P001 | Maize | nucleus, plastid | 31.19 | 17.17 |
| Zm00001d048829_P001 | Maize | plastid | 24.44 | 16.52 |
Protein Annotations
| EMBL:BT056127 | EMBL:EU952611 | EnsemblPlants:Zm00001d051005_P001 | EnsemblPlants:Zm00001d051005_T001 | EnsemblPlantsGene:Zm00001d051005 | InterPro:Remorin_C |
| ncoils:Coil | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF16 | PFAM:PF03763 | ProteinID:AQK53422.1 | SEG:seg |
| UniParc:UPI000182BCF4 | UniProt:B6SIP6 | MapMan:35.2 | : | : | : |
Description
Remorin family protein
Coordinates
chr4:+:136343710..136345439
Molecular Weight (calculated)
33661.7 Da
IEP (calculated)
11.063
GRAVY (calculated)
-0.820
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRSSQGMMG LSYDADSGRR LLARYAKAKP RPSKWDDAQR WLSSSRAHDD DDRRRSSCAD DRLLLPSASQ KARHSWSAAD GGAALPAALG LGARDDAGAE
101: AETKRVDSVL AYGQPPRCPS LRDVGTEMTP AGSKEPSRAN TPRATLPATP PSTAGRAIHA PLRPPDLSTV DGGSPPGLAA ADRDETAPGA PTTTAVSPAA
201: TWDAAERAKH MARYRREEMK IQAWENRRRQ KAELQMKVAE AKAERMKLRA QEKTASKLAS AQAAAREKRA QAEAKLNRRA ARVDRADALR RTGHLPSSSS
301: VFSLKLPLMC R
101: AETKRVDSVL AYGQPPRCPS LRDVGTEMTP AGSKEPSRAN TPRATLPATP PSTAGRAIHA PLRPPDLSTV DGGSPPGLAA ADRDETAPGA PTTTAVSPAA
201: TWDAAERAKH MARYRREEMK IQAWENRRRQ KAELQMKVAE AKAERMKLRA QEKTASKLAS AQAAAREKRA QAEAKLNRRA ARVDRADALR RTGHLPSSSS
301: VFSLKLPLMC R
001: MRSSVEDNKG WIGPATPEIS NGFEFQKGSN RTPNHHRSTM GKPAPSKWDD AQKWLSGVGF ARGGGGGGDK SSHHSRSNKP RNSNADDLRL IASASQRERE
101: GEDQYVEYDD EEMAAGRPEV ETKNVDCGES VWRKESSINP TAVIRSVCVR DMGTEMTPIG SQEPSRTATP VRATTPVGRS PVTSPVRASQ RGEAVGVVME
201: TVTEVRRVES NNSEKVNGFV ESKKAMSAME ARAMAWDEAE RAKFMARYKR EEVKIQAWEN HEKRKAEMEM KKMEVKAERM KARAEEKLAN KLAATKRIAE
301: ERRANAEAKL NEKAVKTSEK ADYIRRSGHL PSSFSFSFKL PSRCWCQ
101: GEDQYVEYDD EEMAAGRPEV ETKNVDCGES VWRKESSINP TAVIRSVCVR DMGTEMTPIG SQEPSRTATP VRATTPVGRS PVTSPVRASQ RGEAVGVVME
201: TVTEVRRVES NNSEKVNGFV ESKKAMSAME ARAMAWDEAE RAKFMARYKR EEVKIQAWEN HEKRKAEMEM KKMEVKAERM KARAEEKLAN KLAATKRIAE
301: ERRANAEAKL NEKAVKTSEK ADYIRRSGHL PSSFSFSFKL PSRCWCQ
Arabidopsis Description
F12A21.28 [Source:UniProtKB/TrEMBL;Acc:Q9SR48]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.