Factsheet for Bra033989.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12657	Canola	cytosol	99.15	99.72
CDY32543	Canola	nucleus	96.9	97.45
Bra004237.1-P	Field mustard	nucleus	78.59	87.74
AT1G67590.1	Thale cress	nucleus	83.66	85.59
PGSC0003DMT400044982	Potato	nucleus	57.18	58.33
Solyc05g014710.2.1	Tomato	nucleus	57.18	58.0
VIT_01s0010g02560.t01	Wine grape	nucleus	58.59	57.94
GSMUA_Achr9P07790_001	Banana	nucleus	49.3	55.73
KRH58742	Soybean	nucleus	55.49	53.68
KRH42640	Soybean	nucleus	54.93	53.13
TraesCS4A01G238400.1	Wheat	nucleus	52.11	53.01
HORVU4Hr1G012760.3	Barley	nucleus	52.11	52.71
TraesCS4D01G075000.1	Wheat	nucleus	52.11	52.41
TraesCS4B01G076500.1	Wheat	nucleus	51.83	51.98
GSMUA_Achr3P17060_001	Banana	nucleus	50.42	51.88
Zm00001d050790_P003	Maize	nucleus	46.2	48.38
OQU85140	Sorghum	cytosol	47.61	47.08
Zm00001d051005_P001	Maize	mitochondrion, nucleus	34.93	39.87
EES05380	Sorghum	mitochondrion	35.21	37.54
Bra026612.1-P	Field mustard	nucleus	36.9	31.57
Os02t0602000-01	Rice	mitochondrion	29.3	30.59
Bra024828.1-P	Field mustard	nucleus	36.62	28.89
Bra032380.1-P	Field mustard	nucleus	33.8	24.74
Bra004657.1-P	Field mustard	cytosol	17.75	23.33
Bra010777.1-P	Field mustard	nucleus	32.68	21.52
Bra007335.1-P	Field mustard	nucleus	16.9	20.48
Bra040560.1-P	Field mustard	nucleus	22.54	19.09
Bra039695.1-P	Field mustard	cytosol	24.79	12.98
Bra040561.1-P	Field mustard	cytosol	1.69	2.53

Protein Annotations

EnsemblPlants:Bra033989.1	EnsemblPlants:Bra033989.1-P	EnsemblPlantsGene:Bra033989	InterPro:Remorin_C	ncoils:Coil	PANTHER:PTHR31471
PANTHER:PTHR31471:SF15	PFAM:PF03763	SEG:seg	UniParc:UPI0002545F1F	UniProt:M4EYU7	MapMan:35.2

Description

AT1G67590 (E=2e-127) | remorin family protein

Coordinates

chrA02:-:10401481..10402787

Molecular Weight (calculated)

39203.9 Da

IEP (calculated)

9.761

GRAVY (calculated)

-0.973

Length

355 amino acids

Sequence
(BLAST)

001: MRSQGVEDNK GCLGPGTPEM NGHGNIGFEF QKGSNRTPNH HRSTMGKPAP SKWDDAQKWL SGVGLSRGGG GGGGEKNHHS RSCKPRNSNA DDLRLIASAS
101: QREREGEDQY VEYEDGDAAA GRPEVETKNV DCGEPGGSVW RKESINPTAA IRSVCVRDMG TEMTPIGSQE PSRTATPVRA TTPVGRSPVT SPVRASRRGE
201: TVRMATEVAT VTETRSVASN NNENIGLGDN SNTKAMNAME ARAMAWDEAE RAKFMARYKR EEVKIQAWEN HEKRKAEMEM KKMEVKAERM KARAEEKLAN
301: KLAATKRIAE ERRANAEAKL NEMSVRTSER ADYIRRSGHL PSSFSFKFPS FSLCW

Best Arabidopsis Sequence Match ( AT1G67590.1 )
(BLAST)

001: MRSSVEDNKG WIGPATPEIS NGFEFQKGSN RTPNHHRSTM GKPAPSKWDD AQKWLSGVGF ARGGGGGGDK SSHHSRSNKP RNSNADDLRL IASASQRERE
101: GEDQYVEYDD EEMAAGRPEV ETKNVDCGES VWRKESSINP TAVIRSVCVR DMGTEMTPIG SQEPSRTATP VRATTPVGRS PVTSPVRASQ RGEAVGVVME
201: TVTEVRRVES NNSEKVNGFV ESKKAMSAME ARAMAWDEAE RAKFMARYKR EEVKIQAWEN HEKRKAEMEM KKMEVKAERM KARAEEKLAN KLAATKRIAE
301: ERRANAEAKL NEKAVKTSEK ADYIRRSGHL PSSFSFSFKL PSRCWCQ

Arabidopsis Description

F12A21.28 [Source:UniProtKB/TrEMBL;Acc:Q9SR48]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.