Factsheet for Bra010777.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
extracellular 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90244	Canola	nucleus	87.38	94.2
Bra032380.1-P	Field mustard	nucleus	71.61	79.59
AT1G30320.1	Thale cress	nucleus, plastid	72.91	77.21
VIT_10s0003g04090.t01	Wine grape	nucleus	53.43	54.75
KRH42599	Soybean	nucleus	51.95	51.85
KRH58701	Soybean	nucleus	51.58	51.48
KRH44798	Soybean	nucleus	51.39	50.27
PGSC0003DMT400031464	Potato	nucleus	47.87	49.71
Solyc08g045640.2.1	Tomato	mitochondrion	43.97	47.98
Bra026612.1-P	Field mustard	nucleus	30.06	39.04
Os12t0613600-01	Rice	nucleus	30.24	38.17
Os04t0620200-01	Rice	nucleus, plastid	37.66	38.16
Bra024828.1-P	Field mustard	nucleus	31.35	37.56
GSMUA_Achr5P26590_001	Banana	nucleus	35.25	37.33
Zm00001d041496_P001	Maize	nucleus	26.35	37.27
TraesCS2B01G485700.1	Wheat	nucleus, plastid	35.81	36.55
TraesCS2A01G464000.1	Wheat	nucleus, plastid	35.62	36.5
TraesCS2D01G464900.1	Wheat	nucleus, plastid	35.81	36.48
EES11442	Sorghum	nucleus, plastid	35.81	36.21
GSMUA_Achr10P...	Banana	nucleus	36.36	36.16
KXG23993	Sorghum	nucleus	30.43	35.65
HORVU2Hr1G103570.7	Barley	nucleus, plastid	34.88	35.47
Zm00001d002274_P001	Maize	nucleus, plastid	35.81	34.16
TraesCS5A01G040500.1	Wheat	nucleus	28.2	33.85
TraesCS5D01G047600.3	Wheat	cytosol	28.01	33.71
Bra033989.1-P	Field mustard	cytosol	21.52	32.68
TraesCS5B01G041700.1	Wheat	mitochondrion, nucleus	28.2	32.27
Bra004237.1-P	Field mustard	nucleus	17.25	29.25
HORVU5Hr1G009780.6	Barley	cytosol	25.6	28.51
Bra040560.1-P	Field mustard	nucleus	16.7	21.48
Bra004657.1-P	Field mustard	cytosol	10.39	20.74
Bra007335.1-P	Field mustard	nucleus	10.39	19.11
Bra039695.1-P	Field mustard	cytosol	17.07	13.57
Bra040561.1-P	Field mustard	cytosol	0.74	1.69

Protein Annotations

EnsemblPlants:Bra010777.1	EnsemblPlants:Bra010777.1-P	EnsemblPlantsGene:Bra010777	InterPro:Remorin_C	ncoils:Coil	PANTHER:PTHR31471
PANTHER:PTHR31471:SF17	PFAM:PF03763	SEG:seg	UniParc:UPI0002546F11	UniProt:M4D2S4	MapMan:35.2

Description

AT1G30320 (E=7e-173) | remorin family protein

Coordinates

chrA08:-:16390828..16394198

Molecular Weight (calculated)

60580.8 Da

IEP (calculated)

8.426

GRAVY (calculated)

-1.009

Length

539 amino acids

Sequence
(BLAST)

001: MLPLSRRRGE DESEDGGSVV ENRWGNIYTS TDREDLALAM EYERIEKVKQ KSILSPTKLR MKLMGSHNNK KREGSNNNSS RTSPVRLQVS DGTELSKNSL
101: LASNSDSYDD DNVAASTTDI RVAKLPVLDL SDTQASRHGS EGLTRETNQP KPQQLKKTDL SMALRPQEDE SLDYDSNASS SSFEFHGGVC GERSNQNHVS
201: REYPSRQMPS KWNDAEKLIM SRQNMVMRKN GHGKRVAVRV ITDNTGCEYN KSRIQTDGFE KFPRYVPTVP HPILTQGYGG NLLIEQSTQS NDLLDTTKES
301: SRDETPAGPV IRSVCMRDMG TDMTPIPSQE PSRSVTPVGA TTPLRSPTSS LPSTPRGGQQ EESQDPSANT KRELSEEEMK AKTRREIVTL GVRLGKMNIA
401: AWASKEEEES NKNKVDAEET HRIEFDKRAS AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMQRIE AKVEQMKAEA EARIVKKIAM AKQRSEEKRA
501: SAEARKARDA EKAVAEAKYI RETGRIPASG YKICCGWFS

Best Arabidopsis Sequence Match ( AT1G30320.1 )
(BLAST)

001: MDYERIQKVQ KSIISPTKLR MKLMGPLNNM KREGSKSNSN SSRTSPSRLQ IPDDSEFSKN SLLASNSYSD DDVAATTTDI EVAKLPNEPV LYPTENDNQG
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS

Arabidopsis Description

Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8G3]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.