Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH42599 | Soybean | nucleus | 95.0 | 95.0 |
| KRH44798 | Soybean | nucleus | 93.52 | 91.65 |
| VIT_10s0003g04090.t01 | Wine grape | nucleus | 66.85 | 68.63 |
| PGSC0003DMT400031464 | Potato | nucleus | 60.56 | 63.01 |
| CDY09599 | Canola | nucleus | 51.67 | 58.61 |
| Bra032380.1-P | Field mustard | nucleus | 51.67 | 57.53 |
| CDY26269 | Canola | nucleus | 51.3 | 57.11 |
| AT1G30320.1 | Thale cress | nucleus, plastid | 53.7 | 56.97 |
| CDX90244 | Canola | nucleus | 52.41 | 56.6 |
| CDY12047 | Canola | nucleus | 52.41 | 56.6 |
| Solyc08g045640.2.1 | Tomato | mitochondrion | 50.74 | 55.47 |
| Bra010777.1-P | Field mustard | nucleus | 51.48 | 51.58 |
| GSMUA_Achr5P26590_001 | Banana | nucleus | 41.85 | 44.4 |
| GSMUA_Achr10P... | Banana | nucleus | 43.89 | 43.73 |
| Os12t0613600-01 | Rice | nucleus | 34.26 | 43.33 |
| Os04t0620200-01 | Rice | nucleus, plastid | 41.67 | 42.29 |
| Zm00001d041496_P001 | Maize | nucleus | 29.44 | 41.73 |
| TraesCS5D01G047600.3 | Wheat | cytosol | 33.7 | 40.62 |
| EES11442 | Sorghum | nucleus, plastid | 40.0 | 40.53 |
| KXG23993 | Sorghum | nucleus | 34.44 | 40.43 |
| TraesCS5A01G040500.1 | Wheat | nucleus | 33.33 | 40.09 |
| KRH58560 | Soybean | nucleus | 37.41 | 39.84 |
| TraesCS2D01G464900.1 | Wheat | nucleus, plastid | 38.89 | 39.7 |
| TraesCS2B01G485700.1 | Wheat | nucleus, plastid | 38.7 | 39.58 |
| TraesCS2A01G464000.1 | Wheat | nucleus, plastid | 38.33 | 39.35 |
| KRH42459 | Soybean | nucleus | 37.04 | 39.22 |
| HORVU2Hr1G103570.7 | Barley | nucleus, plastid | 38.15 | 38.87 |
| TraesCS5B01G041700.1 | Wheat | mitochondrion, nucleus | 33.7 | 38.64 |
| Zm00001d002274_P001 | Maize | nucleus, plastid | 40.0 | 38.23 |
| HORVU5Hr1G009780.6 | Barley | cytosol | 29.44 | 32.85 |
| KRH58742 | Soybean | nucleus | 21.11 | 31.06 |
| KRH42640 | Soybean | nucleus | 20.56 | 30.25 |
| KRH06283 | Soybean | cytosol | 20.56 | 23.47 |
| KRH47718 | Soybean | nucleus | 20.19 | 23.24 |
| KRG95278 | Soybean | nucleus | 11.3 | 22.51 |
| KRH66963 | Soybean | nucleus | 7.96 | 19.11 |
| KRH71974 | Soybean | nucleus | 10.56 | 19.06 |
| KRH33097 | Soybean | nucleus | 10.37 | 18.92 |
Protein Annotations
| EMBL:ACUP02003283 | EnsemblPlants:KRH58701 | EnsemblPlantsGene:GLYMA_05G143500 | EntrezGene:100787239 | InterPro:Remorin_C | ncoils:Coil |
| PANTHER:PTHR31471 | PANTHER:PTHR31471:SF17 | PFAM:PF03763 | ProteinID:KRH58701 | ProteinID:KRH58701.1 | SEG:seg |
| UniParc:UPI0002339555 | UniProt:I1K3H9 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:33741083..33744871
Molecular Weight (calculated)
60454.8 Da
IEP (calculated)
9.424
GRAVY (calculated)
-1.008
Length
540 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYERIEKVQ AGIISPSKLR MKLLGPHHHR KKDGSNSNSS RTSPSRIEDA EFVNSLLDSK NDNLDDEVTS PSLDVLSLKP SSNALLDRKQ NGQISYEPKE
101: TMPKENGDMG RAKTHHFPKV DTGSSSAIHA VRAIEDENLD YDSNASSSSF EFDKGERPGN NPATRSLFRP IPSKWNDAEK WIMNRQNIQA NHSKKKTAHN
201: QANRMPTNMG RVAPESGNCD HKLPTGKVTE TKRVDFCQPT SHMGFEKFSF VPSDAHSVSG QAHGRNPVVE SLPQSKDLKE VNELGLSCSR STDDQSVTPG
301: IRSVAMRDMG TEMTPVPSQE PSRTATPVGS ATPLRSPVSS MPSTPRRGAP APTPLDNTTD EDSQFPVENG KRNLSEEEMK IKTRREIAAL GVQLGKMNIA
401: AWASKDEQEK NKSSPQEANV NEQERIEFEK RAALWEEAEK SKHTARFKRE EIKIQAWESQ QKAKLEAEMR RIEAKVEQMR AQTHAKMVKK IAMARQRSEE
501: KRAAAEARKN REAERTAAQT EYIRQTGRLP SSNYICCGWL
101: TMPKENGDMG RAKTHHFPKV DTGSSSAIHA VRAIEDENLD YDSNASSSSF EFDKGERPGN NPATRSLFRP IPSKWNDAEK WIMNRQNIQA NHSKKKTAHN
201: QANRMPTNMG RVAPESGNCD HKLPTGKVTE TKRVDFCQPT SHMGFEKFSF VPSDAHSVSG QAHGRNPVVE SLPQSKDLKE VNELGLSCSR STDDQSVTPG
301: IRSVAMRDMG TEMTPVPSQE PSRTATPVGS ATPLRSPVSS MPSTPRRGAP APTPLDNTTD EDSQFPVENG KRNLSEEEMK IKTRREIAAL GVQLGKMNIA
401: AWASKDEQEK NKSSPQEANV NEQERIEFEK RAALWEEAEK SKHTARFKRE EIKIQAWESQ QKAKLEAEMR RIEAKVEQMR AQTHAKMVKK IAMARQRSEE
501: KRAAAEARKN REAERTAAQT EYIRQTGRLP SSNYICCGWL
001: MDYERIQKVQ KSIISPTKLR MKLMGPLNNM KREGSKSNSN SSRTSPSRLQ IPDDSEFSKN SLLASNSYSD DDVAATTTDI EVAKLPNEPV LYPTENDNQG
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8G3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.