CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44798	Soybean	nucleus	97.41	95.46
KRH58701	Soybean	nucleus	95.0	95.0
VIT_10s0003g04090.t01	Wine grape	nucleus	66.3	68.06
PGSC0003DMT400031464	Potato	nucleus	60.0	62.43
CDY09599	Canola	nucleus	51.85	58.82
AT1G30320.1	Thale cress	nucleus, plastid	54.81	58.15
CDX90244	Canola	nucleus	53.15	57.4
CDY12047	Canola	nucleus	53.15	57.4
Bra032380.1-P	Field mustard	nucleus	51.48	57.32
CDY26269	Canola	nucleus	51.48	57.32
Solyc08g045640.2.1	Tomato	mitochondrion	50.0	54.66
Bra010777.1-P	Field mustard	nucleus	51.85	51.95
GSMUA_Achr10P...	Banana	nucleus	43.7	43.54
Os12t0613600-01	Rice	nucleus	34.07	43.09
GSMUA_Achr5P26590_001	Banana	nucleus	40.56	43.03
Os04t0620200-01	Rice	nucleus, plastid	41.67	42.29
Zm00001d041496_P001	Maize	nucleus	29.26	41.47
KXG23993	Sorghum	nucleus	34.26	40.22
EES11442	Sorghum	nucleus, plastid	39.63	40.15
TraesCS5D01G047600.3	Wheat	cytosol	33.15	39.96
KRH58560	Soybean	nucleus	37.22	39.65
TraesCS2D01G464900.1	Wheat	nucleus, plastid	38.52	39.32
TraesCS2B01G485700.1	Wheat	nucleus, plastid	38.33	39.2
TraesCS5A01G040500.1	Wheat	nucleus	32.59	39.2
KRH42459	Soybean	nucleus	36.85	39.02
TraesCS2A01G464000.1	Wheat	nucleus, plastid	37.96	38.97
HORVU2Hr1G103570.7	Barley	nucleus, plastid	37.78	38.49
TraesCS5B01G041700.1	Wheat	mitochondrion, nucleus	33.33	38.22
Zm00001d002274_P001	Maize	nucleus, plastid	39.63	37.88
HORVU5Hr1G009780.6	Barley	cytosol	29.07	32.44
KRH58742	Soybean	nucleus	20.93	30.79
KRH42640	Soybean	nucleus	20.37	29.97
KRH06283	Soybean	cytosol	20.37	23.26
KRH47718	Soybean	nucleus	20.0	23.03
KRG95278	Soybean	nucleus	11.3	22.51
KRH33097	Soybean	nucleus	10.56	19.26
KRH66963	Soybean	nucleus	7.96	19.11
KRH71974	Soybean	nucleus	10.56	19.06

Protein Annotations

EMBL:ACUP02004819	EnsemblPlants:KRH42599	EnsemblPlantsGene:GLYMA_08G099900	EntrezGene:100805128	InterPro:Remorin_C	ncoils:Coil
PANTHER:PTHR31471	PANTHER:PTHR31471:SF17	PFAM:PF03763	ProteinID:KRH42599	ProteinID:KRH42599.1	SEG:seg
UniParc:UPI0002338B18	UniProt:I1KRX0	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:7655587..7659512

Molecular Weight (calculated)

60607.2 Da

IEP (calculated)

9.540

GRAVY (calculated)

-0.968

Length

540 amino acids

Sequence
(BLAST)

001: MEYERIEKVQ AGIISPSKLR MKLLGPLHHR KKDGSNSNSS RTSPSRIEDA EFVNSLLGSK NDNLDDEVTS PSLDVLSLKP SSDAVLDRRQ NGQISYEPKE
101: TMPKENSDTG RVKMQHFQKV DTGSSSAIHA VRAIEDENLD YDSNASSSSF EFDKGERPGN NPATRSLFRP IPSKWNDAEK WIMNRQNIQA NHSKKNTAHN
201: QANRMPTNMG RVAPESGNYD HKLPIGKATE TKRVDICQPT SHMGFEKFSF VPSDAHSVSG QAHGRNPVVE SLPQSKDLKD VNELGLCCSR STDDQSVMPG
301: IRSVAMRDMG TEMTPVPSQE PSRTATPVGS ATPLRSPVSS MPSTPRRGAP APTPLDNTTN EDSQFPVENG KRHLSEEEMK IKTRREIAAL GVQLGKMNIA
401: AWASKDEQEK NKSSPRDMSV QEQERIEFEK RAALWEEAEK SKHTARFKRE EIKIQAWESQ QKAKLEAEMR RIEAKVEQMR AQTHAKMVKK IAMARQRSEE
501: KRAAAEARKN REAERTVAQT EYIRQTGRLP SSNYICCGWL

Best Arabidopsis Sequence Match ( AT1G30320.1 )
(BLAST)

001: MDYERIQKVQ KSIISPTKLR MKLMGPLNNM KREGSKSNSN SSRTSPSRLQ IPDDSEFSKN SLLASNSYSD DDVAATTTDI EVAKLPNEPV LYPTENDNQG
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS

Arabidopsis Description

Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8G3]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.