Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0003g04090.t01 | Wine grape | nucleus | 44.4 | 42.97 |
| KRH58701 | Soybean | nucleus | 44.4 | 41.85 |
| Os04t0620200-01 | Rice | nucleus, plastid | 42.83 | 40.98 |
| PGSC0003DMT400031464 | Potato | nucleus | 41.65 | 40.85 |
| CDY09599 | Canola | nucleus | 38.11 | 40.76 |
| KRH42599 | Soybean | nucleus | 43.03 | 40.56 |
| KRH44798 | Soybean | nucleus | 43.61 | 40.29 |
| Bra032380.1-P | Field mustard | nucleus | 38.31 | 40.21 |
| TraesCS2A01G464000.1 | Wheat | nucleus, plastid | 41.26 | 39.92 |
| GSMUA_Achr10P... | Banana | nucleus | 42.24 | 39.67 |
| CDY12047 | Canola | nucleus | 38.9 | 39.6 |
| EES11442 | Sorghum | nucleus, plastid | 41.45 | 39.59 |
| TraesCS2B01G485700.1 | Wheat | nucleus, plastid | 41.06 | 39.58 |
| TraesCS2D01G464900.1 | Wheat | nucleus, plastid | 41.06 | 39.51 |
| CDY26269 | Canola | nucleus | 37.52 | 39.38 |
| AT1G30320.1 | Thale cress | nucleus, plastid | 39.1 | 39.1 |
| CDX90244 | Canola | nucleus | 38.11 | 38.8 |
| HORVU2Hr1G103570.7 | Barley | nucleus, plastid | 39.88 | 38.3 |
| Solyc08g045640.2.1 | Tomato | mitochondrion | 35.95 | 37.04 |
| Zm00001d002274_P001 | Maize | nucleus, plastid | 41.06 | 36.99 |
| GSMUA_Achr5P11780_001 | Banana | cytosol | 22.4 | 35.29 |
| Bra010777.1-P | Field mustard | nucleus | 37.33 | 35.25 |
| GSMUA_Achr1P02030_001 | Banana | nucleus | 30.45 | 31.63 |
| GSMUA_Achr9P07790_001 | Banana | nucleus | 19.25 | 31.21 |
| GSMUA_Achr11P... | Banana | nucleus | 30.06 | 31.16 |
| GSMUA_Achr3P17060_001 | Banana | nucleus | 20.83 | 30.72 |
| GSMUA_Achr2P10980_001 | Banana | nucleus | 25.15 | 30.4 |
| GSMUA_Achr5P19220_001 | Banana | nucleus | 24.56 | 29.55 |
| GSMUA_Achr4P33120_001 | Banana | nucleus | 12.97 | 24.26 |
| GSMUA_Achr6P00160_001 | Banana | nucleus | 12.77 | 23.99 |
| GSMUA_Achr2P13770_001 | Banana | cytosol, nucleus, plastid | 12.97 | 23.57 |
| GSMUA_Achr10P... | Banana | nucleus | 17.88 | 20.22 |
| GSMUA_Achr2P07310_001 | Banana | nucleus | 18.66 | 19.08 |
| CDY62474 | Canola | nucleus | 27.7 | 16.13 |
| CDY62472 | Canola | nucleus | 27.7 | 16.13 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P26590_001 | EnsemblPlants:GSMUA_Achr5T26590_001 | EnsemblPlantsGene:GSMUA_Achr5G26590_001 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 |
| PANTHER:PTHR31471:SF17 | PFAM:PF03763 | SEG:seg | UniParc:UPI000296BB9C | UniProt:M0T1Y4 | MapMan:35.2 |
Description
remorin family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G26590_001]
Coordinates
chr5:-:27325291..27329891
Molecular Weight (calculated)
56528.0 Da
IEP (calculated)
9.799
GRAVY (calculated)
-0.741
Length
509 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYERIRKVQ IGLLSPTKLR MKLLGPRNSA RKGGSNSAKM PPSKNEDMKS ARNNLLVGDI DTEGHVNRSL SNEKINTSCI KQDYCRSAPH QAYSNSSLSI
101: IHPVRTIDEG GGNCLHSRND TVSSFEFHRV ERIIQQPSLG LFSGHVPSKW NDAEKWIINR QIASPSVKKK TPAQKQGSYQ TSSLCRLETD STIAEHKASV
201: VQALDSMRNE FNQTASQDVV EKFSFVPHAS NNKAVESVDS SPYSGTSGSC SRSGEEVNHQ EFSIMKRLAS EPTVVPPMQS VSMRDIGTEM TPVPTPLGSI
301: TPTRSSISSL PSTPRQGVAS QLSTEEMKDT EQDSVTKGGK DKLTEREMRL KIRREIAALG IQLGKMNIAS WASKEEVEQC SPSPKALVAD PTEKEYKACA
401: AAWEEAENTK HMARYKREEV KIQAWECRWK AKIEAKTKSI EAKAERVRAH AIEKMAEKLA MTRRQVDEKQ AAAQARMNKQ ASRTAHKAEH IRRTGQIPSP
501: NYLCCGGFS
101: IHPVRTIDEG GGNCLHSRND TVSSFEFHRV ERIIQQPSLG LFSGHVPSKW NDAEKWIINR QIASPSVKKK TPAQKQGSYQ TSSLCRLETD STIAEHKASV
201: VQALDSMRNE FNQTASQDVV EKFSFVPHAS NNKAVESVDS SPYSGTSGSC SRSGEEVNHQ EFSIMKRLAS EPTVVPPMQS VSMRDIGTEM TPVPTPLGSI
301: TPTRSSISSL PSTPRQGVAS QLSTEEMKDT EQDSVTKGGK DKLTEREMRL KIRREIAALG IQLGKMNIAS WASKEEVEQC SPSPKALVAD PTEKEYKACA
401: AAWEEAENTK HMARYKREEV KIQAWECRWK AKIEAKTKSI EAKAERVRAH AIEKMAEKLA MTRRQVDEKQ AAAQARMNKQ ASRTAHKAEH IRRTGQIPSP
501: NYLCCGGFS
001: MDYERIQKVQ KSIISPTKLR MKLMGPLNNM KREGSKSNSN SSRTSPSRLQ IPDDSEFSKN SLLASNSYSD DDVAATTTDI EVAKLPNEPV LYPTENDNQG
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8G3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.