Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09599 | Canola | nucleus | 76.03 | 81.3 |
| CDX90244 | Canola | nucleus | 78.78 | 80.2 |
| Bra032380.1-P | Field mustard | nucleus | 76.23 | 80.0 |
| CDY26269 | Canola | nucleus | 76.03 | 79.79 |
| CDY12047 | Canola | nucleus | 78.0 | 79.4 |
| Bra010777.1-P | Field mustard | nucleus | 77.21 | 72.91 |
| VIT_10s0003g04090.t01 | Wine grape | nucleus | 60.51 | 58.56 |
| KRH42599 | Soybean | nucleus | 58.15 | 54.81 |
| KRH58701 | Soybean | nucleus | 56.97 | 53.7 |
| PGSC0003DMT400031464 | Potato | nucleus | 54.62 | 53.56 |
| KRH44798 | Soybean | nucleus | 56.97 | 52.63 |
| Solyc08g045640.2.1 | Tomato | mitochondrion | 46.56 | 47.98 |
| Os12t0613600-01 | Rice | nucleus | 33.01 | 39.34 |
| GSMUA_Achr5P26590_001 | Banana | nucleus | 39.1 | 39.1 |
| Os04t0620200-01 | Rice | nucleus, plastid | 40.67 | 38.91 |
| Zm00001d041496_P001 | Maize | nucleus | 29.08 | 38.85 |
| GSMUA_Achr10P... | Banana | nucleus | 41.06 | 38.56 |
| EES11442 | Sorghum | nucleus, plastid | 39.29 | 37.52 |
| TraesCS2B01G485700.1 | Wheat | nucleus, plastid | 38.9 | 37.5 |
| TraesCS2A01G464000.1 | Wheat | nucleus, plastid | 38.51 | 37.26 |
| TraesCS2D01G464900.1 | Wheat | nucleus, plastid | 38.7 | 37.24 |
| KXG23993 | Sorghum | nucleus | 33.6 | 37.17 |
| AT2G02170.2 | Thale cress | nucleus | 34.97 | 36.63 |
| HORVU2Hr1G103570.7 | Barley | nucleus, plastid | 37.33 | 35.85 |
| AT1G67590.1 | Thale cress | nucleus | 24.36 | 35.73 |
| TraesCS5D01G047600.3 | Wheat | cytosol | 31.24 | 35.49 |
| TraesCS5A01G040500.1 | Wheat | nucleus | 31.24 | 35.41 |
| Zm00001d002274_P001 | Maize | nucleus, plastid | 38.31 | 34.51 |
| TraesCS5B01G041700.1 | Wheat | mitochondrion, nucleus | 31.63 | 34.18 |
| HORVU5Hr1G009780.6 | Barley | cytosol | 29.27 | 30.79 |
| AT2G41870.1 | Thale cress | nucleus | 12.97 | 24.09 |
| AT1G53860.1 | Thale cress | nucleus | 20.63 | 23.76 |
| AT3G57540.1 | Thale cress | nucleus | 11.39 | 19.59 |
Protein Annotations
| MapMan:35.2 | EntrezGene:839912 | ProteinID:AAG51095.1 | ProteinID:AEE31205.1 | EMBL:AK118811 | ArrayExpress:AT1G30320 |
| EnsemblPlantsGene:AT1G30320 | RefSeq:AT1G30320 | TAIR:AT1G30320 | RefSeq:AT1G30320-TAIR-G | EnsemblPlants:AT1G30320.1 | TAIR:AT1G30320.1 |
| EMBL:BT006124 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 |
| RefSeq:NP_174322.1 | PFAM:PF03763 | PO:PO:0000293 | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF17 | UniProt:Q9C8G3 |
| InterPro:Remorin_C | UniParc:UPI00000AC24A | SEG:seg | : | : | : |
Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8G3]
Coordinates
chr1:+:10680079..10683137
Molecular Weight (calculated)
57401.0 Da
IEP (calculated)
7.911
GRAVY (calculated)
-1.075
Length
509 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYERIQKVQ KSIISPTKLR MKLMGPLNNM KREGSKSNSN SSRTSPSRLQ IPDDSEFSKN SLLASNSYSD DDVAATTTDI EVAKLPNEPV LYPTENDNQG
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.