CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041496_P001	Maize	nucleus	67.39	81.36
Os12t0613600-01	Rice	nucleus	66.3	71.43
TraesCS5D01G047600.3	Wheat	cytosol	63.04	64.73
TraesCS5A01G040500.1	Wheat	nucleus	62.17	63.7
TraesCS5B01G041700.1	Wheat	mitochondrion, nucleus	62.61	61.15
HORVU5Hr1G009780.6	Barley	cytosol	56.74	53.93
GSMUA_Achr10P...	Banana	nucleus	43.26	36.72
CDY09599	Canola	nucleus	36.74	35.5
CDY26269	Canola	nucleus	36.96	35.05
VIT_10s0003g04090.t01	Wine grape	nucleus	40.0	34.98
Bra032380.1-P	Field mustard	nucleus	36.74	34.85
KRH58701	Soybean	nucleus	40.43	34.44
KRH42599	Soybean	nucleus	40.22	34.26
PGSC0003DMT400031464	Potato	nucleus	38.26	33.91
AT1G30320.1	Thale cress	nucleus, plastid	37.17	33.6
KXG40319	Sorghum	nucleus	30.87	33.49
KRH44798	Soybean	nucleus	40.0	33.39
CDX90244	Canola	nucleus	35.65	32.8
CDY12047	Canola	nucleus	35.65	32.8
Solyc08g045640.2.1	Tomato	mitochondrion	35.22	32.79
EES11442	Sorghum	nucleus, plastid	35.87	30.96
Bra010777.1-P	Field mustard	nucleus	35.65	30.43
EES06158	Sorghum	nucleus, plastid	34.78	28.07
EES05380	Sorghum	mitochondrion	17.61	24.32
OQU85140	Sorghum	cytosol	18.7	23.96
EER99573	Sorghum	nucleus	12.61	18.53
EES10116	Sorghum	nucleus, plastid	19.13	17.22
OQU90788	Sorghum	nucleus	9.78	15.41
CDY62474	Canola	nucleus	28.04	14.76
CDY62472	Canola	nucleus	28.04	14.76

Protein Annotations

EnsemblPlants:KXG23993	EnsemblPlantsGene:SORBI_3008G169300	EntrezGene:8070166	InterPro:Remorin_C	ncoils:Coil	PANTHER:PTHR31471
PANTHER:PTHR31471:SF19	PFAM:PF03763	ProteinID:KXG23993	ProteinID:KXG23993.1	ProteinID:OQU79605.1	SEG:seg
UniParc:UPI0003C71B30	UniProt:A0A1B6PE85	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:60361071..60364771

Molecular Weight (calculated)

49326.9 Da

IEP (calculated)

10.643

GRAVY (calculated)

-0.720

Length

460 amino acids

Sequence
(BLAST)

001: MGYERIHKVQ MGVISPTKLR MKLLGSGNKD EPTRKSPRAS PPPSRLDDDD DDHPNNSLLP QELDEEYPKD HRSDSSRSRS DASHGRAARS RSCGGSGSGS
101: DSGVENGASA GGGNFEFCKE ERAALPGTAT ATATAAVSAP FFRQQVPSKW NDAEKWIAGR HVVHSNPIFS KKPAAAAMAS RASGAAASAL TELSSKSSSP
201: SSSVTGPASK PPQKKLRFSP STIAAAAPAV AVSVSMRDVG TEMTPIASQE QSRSGTPAGA ATPSLSPLCS VPSSPRGGGS GASSASSSSA SERELRLRTR
301: REIAALGLQL GKMNIASWAC KEESLLAAAS LDKGAGDIDE EIKRKAFEAR ATAWEESNKC KLASRYQRKE VKIQEWESLQ KSKFEAKLRQ AEAQAEQMKA
401: RAKQDLARRL SALSHKVEGK QARVEARRSR QSSRLARQVE RIRKTGREPC RLRRCCAWFL

Best Arabidopsis Sequence Match ( AT1G30320.1 )
(BLAST)

001: MDYERIQKVQ KSIISPTKLR MKLMGPLNNM KREGSKSNSN SSRTSPSRLQ IPDDSEFSKN SLLASNSYSD DDVAATTTDI EVAKLPNEPV LYPTENDNQG
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS

Arabidopsis Description

Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8G3]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.