Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G047600.3 | Wheat | cytosol | 78.1 | 84.38 |
| TraesCS5A01G040500.1 | Wheat | nucleus | 76.45 | 82.41 |
| TraesCS5B01G041700.1 | Wheat | mitochondrion, nucleus | 77.69 | 79.83 |
| Os12t0613600-01 | Rice | nucleus | 52.69 | 59.72 |
| Zm00001d041496_P001 | Maize | nucleus | 45.66 | 58.01 |
| KXG23993 | Sorghum | nucleus | 53.93 | 56.74 |
| GSMUA_Achr10P... | Banana | nucleus | 35.33 | 31.55 |
| CDY09599 | Canola | nucleus | 30.17 | 30.67 |
| VIT_10s0003g04090.t01 | Wine grape | nucleus | 33.26 | 30.61 |
| CDY26269 | Canola | nucleus | 30.37 | 30.31 |
| Bra032380.1-P | Field mustard | nucleus | 30.17 | 30.1 |
| KRH58701 | Soybean | nucleus | 32.85 | 29.44 |
| AT1G30320.1 | Thale cress | nucleus, plastid | 30.79 | 29.27 |
| KRH42599 | Soybean | nucleus | 32.44 | 29.07 |
| PGSC0003DMT400031464 | Potato | nucleus | 30.99 | 28.9 |
| KRH44798 | Soybean | nucleus | 32.44 | 28.49 |
| CDY12047 | Canola | nucleus | 28.72 | 27.8 |
| HORVU2Hr1G103570.7 | Barley | nucleus, plastid | 30.37 | 27.74 |
| CDX90244 | Canola | nucleus | 28.51 | 27.6 |
| Solyc08g045640.2.1 | Tomato | mitochondrion | 27.89 | 27.33 |
| HORVU0Hr1G040310.2 | Barley | cytosol, mitochondrion, nucleus | 28.31 | 26.65 |
| HORVU4Hr1G085140.6 | Barley | nucleus, plastid | 25.62 | 25.67 |
| Bra010777.1-P | Field mustard | nucleus | 28.51 | 25.6 |
| HORVU4Hr1G012760.3 | Barley | nucleus | 18.18 | 25.07 |
| HORVU2Hr1G084090.2 | Barley | plastid | 15.5 | 17.94 |
| HORVU2Hr1G039030.1 | Barley | cytosol, nucleus | 9.09 | 17.32 |
| HORVU7Hr1G100790.1 | Barley | nucleus | 9.09 | 15.83 |
| HORVU5Hr1G111120.3 | Barley | cytosol | 9.09 | 14.19 |
| HORVU5Hr1G111130.2 | Barley | cytosol, nucleus | 9.5 | 13.61 |
| CDY62474 | Canola | nucleus | 22.52 | 12.47 |
| CDY62472 | Canola | nucleus | 22.52 | 12.47 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G009780.6 | EnsemblPlantsGene:HORVU5Hr1G009780 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF19 |
| PFAM:PF03763 | SEG:seg | UniParc:UPI000B45FD9F | UniProt:A0A287QB61 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr5H:+:24231606..24233701
Molecular Weight (calculated)
50317.8 Da
IEP (calculated)
10.663
GRAVY (calculated)
-0.776
Length
484 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASVGLAAA EHPTPPSAEE IKMGVMSPTK LRMKLLGKGS SHGHGGANNK DEEPSKSPPS RLHADDHLKN SLLPQEPDQG SSSEYPKDRS DSSSSRSRSS
101: GSHGRSAAHP ANGASFEFRM EERAAVAGLG PFFRQQVPSK WNDAEKWIAG RHHVVHSNPI FSRKAAASVH GHTGVGGGCV RVVPESAPPP PPPSDAKKTP
201: ALTELSRSPS PSSPSSLSSV TGPASKQRRD TKLRTQVQVG APSSSVSMRD VGTEMTPIAS QEQSRSGTPA GAATPSFSPL CSVPASPSAS ERELQIRTRR
301: EIAALGLQLG KMSIASWASK EDRFRTSPEK SAGEEDRAKK AEFEARAAAW AESKKCKLAS RYQRKEVRIQ EWENCQKSKF EAKMRHAEDV IVQDSFQVQA
401: DQMKARAKNS LTKRLSTLSH KVEGKQARVE AXXXXXXXXX XXXXGTGGRS GWPGRWSASG RPAACRPGSG AAAGSSVENE TKFR
101: GSHGRSAAHP ANGASFEFRM EERAAVAGLG PFFRQQVPSK WNDAEKWIAG RHHVVHSNPI FSRKAAASVH GHTGVGGGCV RVVPESAPPP PPPSDAKKTP
201: ALTELSRSPS PSSPSSLSSV TGPASKQRRD TKLRTQVQVG APSSSVSMRD VGTEMTPIAS QEQSRSGTPA GAATPSFSPL CSVPASPSAS ERELQIRTRR
301: EIAALGLQLG KMSIASWASK EDRFRTSPEK SAGEEDRAKK AEFEARAAAW AESKKCKLAS RYQRKEVRIQ EWENCQKSKF EAKMRHAEDV IVQDSFQVQA
401: DQMKARAKNS LTKRLSTLSH KVEGKQARVE AXXXXXXXXX XXXXGTGGRS GWPGRWSASG RPAACRPGSG AAAGSSVENE TKFR
001: MDYERIQKVQ KSIISPTKLR MKLMGPLNNM KREGSKSNSN SSRTSPSRLQ IPDDSEFSKN SLLASNSYSD DDVAATTTDI EVAKLPNEPV LYPTENDNQG
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8G3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.