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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 1
  • cytosol 1
  • plasma membrane 1
  • nucleus 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G363600.1 Wheat plastid 94.5 95.64
TraesCS2D01G343900.1 Wheat plastid 94.5 95.18
Os11t0616300-01 Rice nucleus 74.16 62.88
Zm00001d048829_P001 Maize plastid 65.31 59.35
PGSC0003DMT400023636 Potato nucleus 32.54 58.12
EES10116 Sorghum nucleus, plastid 69.86 57.14
GSMUA_Achr10P... Banana nucleus 48.33 44.89
VIT_09s0002g00360.t01 Wine grape nucleus 45.93 42.11
Bra040560.1-P Field mustard nucleus 38.76 38.66
CDY08209 Canola nucleus 38.76 38.66
CDY68168 Canola nucleus 38.52 38.42
KRH47718 Soybean nucleus 42.82 38.17
KRH06283 Soybean cytosol 43.06 38.05
AT1G53860.1 Thale cress nucleus 40.19 38.01
Solyc03g123590.2.1 Tomato nucleus 41.87 37.55
GSMUA_Achr2P07310_001 Banana nucleus 44.02 36.95
CDY36609 Canola cytosol 39.71 25.82
Bra039695.1-P Field mustard cytosol 39.47 24.34
HORVU4Hr1G012760.3 Barley nucleus 19.38 23.08
CDY24070 Canola extracellular 39.23 22.4
HORVU2Hr1G039030.1 Barley cytosol, nucleus 12.44 20.47
HORVU0Hr1G040310.2 Barley cytosol, mitochondrion, nucleus 22.97 18.68
HORVU7Hr1G100790.1 Barley nucleus 11.96 17.99
HORVU4Hr1G085140.6 Barley nucleus, plastid 19.86 17.18
HORVU5Hr1G111120.3 Barley cytosol 12.2 16.45
HORVU5Hr1G111130.2 Barley cytosol, nucleus 12.68 15.68
HORVU5Hr1G009780.6 Barley cytosol 17.94 15.5
HORVU2Hr1G103570.7 Barley nucleus, plastid 18.9 14.91
Bra040561.1-P Field mustard cytosol 0.96 1.69
Protein Annotations
EnsemblPlants:HORVU2Hr1G084090.2EnsemblPlantsGene:HORVU2Hr1G084090InterPro:Remorin_Cncoils:CoilPANTHER:PTHR31471PANTHER:PTHR31471:SF3
PFAM:PF03763SEG:segUniParc:UPI0002949F68UniProt:M0X592MapMan:35.2:
Description
No Description!
Coordinates
chrchr2H:+:609929923..609932263
Molecular Weight (calculated)
46125.7 Da
IEP (calculated)
8.627
GRAVY (calculated)
-0.774
Length
418 amino acids
Sequence
(BLAST)
001: MAAIARSNSS NGHGYHHEAS TTSSSSSSTS LARRRRSVEQ QVPGTPGRPL MFLTSSSSSP AHPQLVSSRR SVPSKWEDAE KWLRQSSDHR GHHHGKAASR
101: QHHIGGPALA TARRTSLDAN ALALYTPPAE VLLKEMLCFT DKYTDNVEPS KESFVFRSSY CEPAKNGAAA VTCADDDLHR RDIGTEMTPL GSSPTSQCHT
201: PIKSTSPARH NTPTGRSGPL VPYNTGSGMD ISELTDCHFA KLDLGAQFDS MLIHWSSKEE EEEEVSKSLR HFEASAGDGG RACDKRVAAV TECRWDDDER
301: AKSCIRYQRE EAKIQAWINL ESAKAEAQSR KLEVKIQKMR SNLEEKLMKR MTSVHRRGEE WRAAAQAQHL QQLRRATTEH QARRVKTISH HLSGTGSNAS
401: CGCFPCNSDN IISGNLLN
Best Arabidopsis Sequence Match ( AT1G53860.1 )
(BLAST)
001: MDFTRNSNTK LHPQTQLLFP PNMEKNSNVS ANPFAEDSLT SRINLKETTD FIKSLPISSN QSSSSSNEMV NERRPSFSSQ KSIGEGRSNG QRRLMLMESP
101: CTPGRGVFSF SSNVSGRRRN FPSKWIDAEK WVTSSGHDSP AHSLKNNQFD GFKHQVEVVY SEKSRVTEEC FHGSVSLSPQ DLILKDKLAN EVPQILPSTE
201: GFIFKDSDKF LRYEEAQVQH RDMGTEMTPI GSVTTSRCHT PFKSSSPARH NTPSQLSGPL TETKNVIDIS EFEDKLRLSG SSTSQYCYSV TSHWNSREEE
301: EEEISKSLRH FDMESELRRS VSESKAPLWD DEDDKIKFCQ RYQREEAKIQ AWVNLENAKA EAQSRKLEVK IQKMRSNLEE KLMKRMDMVH RRAEDWRATA
401: RQQHVEQMQK AAETARKLTN RRGYLVTGRS SCGCLPCNNT CH
Arabidopsis Description
At1g53860 [Source:UniProtKB/TrEMBL;Acc:Q6DBE3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.