Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G517700.1 | Wheat | nucleus | 81.37 | 93.13 |
| TraesCS4D01G343800.1 | Wheat | nucleus | 80.95 | 92.65 |
| TraesCS4B01G349100.1 | Wheat | nucleus | 79.92 | 91.04 |
| Os03t0120200-01 | Rice | nucleus | 69.77 | 79.67 |
| KXG40319 | Sorghum | nucleus | 67.49 | 76.89 |
| Zm00001d027403_P001 | Maize | nucleus | 66.46 | 75.71 |
| Zm00001d048481_P001 | Maize | cytosol, mitochondrion, nucleus | 63.77 | 73.16 |
| GSMUA_Achr5P11780_001 | Banana | cytosol | 29.4 | 43.96 |
| GSMUA_Achr1P02030_001 | Banana | nucleus | 43.06 | 42.45 |
| GSMUA_Achr11P... | Banana | nucleus | 42.44 | 41.75 |
| VIT_01s0010g01760.t01 | Wine grape | nucleus | 43.27 | 40.98 |
| CDY09386 | Canola | nucleus | 33.33 | 40.15 |
| Bra026612.1-P | Field mustard | nucleus | 34.37 | 40.0 |
| HORVU0Hr1G040310.2 | Barley | cytosol, mitochondrion, nucleus | 41.82 | 39.3 |
| CDY03066 | Canola | nucleus | 32.51 | 38.96 |
| GSMUA_Achr2P10980_001 | Banana | nucleus | 33.95 | 38.95 |
| CDY15819 | Canola | nucleus | 35.4 | 38.69 |
| KRH42459 | Soybean | nucleus | 40.79 | 38.63 |
| KRH58560 | Soybean | nucleus | 39.75 | 37.87 |
| CDY17607 | Canola | nucleus | 34.78 | 37.84 |
| AT2G02170.2 | Thale cress | nucleus | 37.68 | 37.45 |
| Bra024828.1-P | Field mustard | nucleus | 34.58 | 37.11 |
| GSMUA_Achr5P19220_001 | Banana | nucleus | 31.06 | 35.46 |
| Solyc01g008180.2.1 | Tomato | nucleus | 38.3 | 35.44 |
| HORVU4Hr1G012760.3 | Barley | nucleus | 21.95 | 30.2 |
| HORVU2Hr1G039030.1 | Barley | cytosol, nucleus | 14.29 | 27.17 |
| HORVU5Hr1G009780.6 | Barley | cytosol | 25.67 | 25.62 |
| HORVU2Hr1G103570.7 | Barley | nucleus, plastid | 27.12 | 24.72 |
| HORVU7Hr1G100790.1 | Barley | nucleus | 12.63 | 21.94 |
| HORVU5Hr1G111120.3 | Barley | cytosol | 12.84 | 20.0 |
| HORVU2Hr1G084090.2 | Barley | plastid | 17.18 | 19.86 |
| HORVU5Hr1G111130.2 | Barley | cytosol, nucleus | 13.25 | 18.93 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G085140.6 | EnsemblPlantsGene:HORVU4Hr1G085140 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF18 |
| PFAM:PF03763 | SEG:seg | UniParc:UPI000B47479D | UniProt:A0A287PY75 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr4H:-:630953282..630956931
Molecular Weight (calculated)
53126.0 Da
IEP (calculated)
9.049
GRAVY (calculated)
-0.888
Length
483 amino acids
Sequence
(BLAST)
(BLAST)
001: ISHSPHVPTP RRFLSSLPLP VSSSPSSSNR DPPPQPTPHR CRCRCRGRCR CRARHAAHGL RAHPRPAPPP VQSGGFSPAK LRAMLLGLEK HQHSGEDTSP
101: EANDSGELDD RRSLECSTST EMSSNSGHRS RNRAPDDDSF DSESSSSGPT TVKRPSAVSA LLPPFSRPTP SKWDDAEKWI SSPTANRTGR VMSATGFAPK
201: KTTFALPEHG ACPPAVAKVV AEVPRNTGTF ADDSVGFTQP DSIKPAETAP TVDEPEPEQA IRSVSMRDMG TEMTPIASQE PSRTGTPIIA SSPTSSRTPT
301: PQRSVESGVG TIDSSKMGMS EEELQLNTRK EIIDLGERLG KTTIAAWASK EERATANFAN VPADKAVEID RETRAADWQE AEKAKYLARF QREEVQIQAW
401: ENHQRAKIEA EMKRVEAKME RKRAREHDRL ARKMASARRR AEAKREAAEA RRSQEAERTE EQAAQIRKTG HIPSSISCWC WCL
101: EANDSGELDD RRSLECSTST EMSSNSGHRS RNRAPDDDSF DSESSSSGPT TVKRPSAVSA LLPPFSRPTP SKWDDAEKWI SSPTANRTGR VMSATGFAPK
201: KTTFALPEHG ACPPAVAKVV AEVPRNTGTF ADDSVGFTQP DSIKPAETAP TVDEPEPEQA IRSVSMRDMG TEMTPIASQE PSRTGTPIIA SSPTSSRTPT
301: PQRSVESGVG TIDSSKMGMS EEELQLNTRK EIIDLGERLG KTTIAAWASK EERATANFAN VPADKAVEID RETRAADWQE AEKAKYLARF QREEVQIQAW
401: ENHQRAKIEA EMKRVEAKME RKRAREHDRL ARKMASARRR AEAKREAAEA RRSQEAERTE EQAAQIRKTG HIPSSISCWC WCL
001: MDYERIGKTQ VTSSGGGFSP GKLRSMLLLG VDRKKNEEEE STPTMRSGSN QIDDPRVYVA SGLDDCKDVD VVSEITDCST SGIARSISLG LQEYSDYDNV
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS
Arabidopsis Description
At2g02170/F5O4.6 [Source:UniProtKB/TrEMBL;Acc:Q9ZUM1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.