Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G464000.1 | Wheat | nucleus, plastid | 93.58 | 94.3 |
| TraesCS2B01G485700.1 | Wheat | nucleus, plastid | 93.4 | 93.75 |
| TraesCS2D01G464900.1 | Wheat | nucleus, plastid | 92.83 | 93.01 |
| Os04t0620200-01 | Rice | nucleus, plastid | 75.66 | 75.38 |
| EES11442 | Sorghum | nucleus, plastid | 73.58 | 73.17 |
| Zm00001d002274_P001 | Maize | nucleus, plastid | 70.38 | 66.02 |
| VIT_10s0003g04090.t01 | Wine grape | nucleus | 41.13 | 41.44 |
| GSMUA_Achr5P26590_001 | Banana | nucleus | 38.3 | 39.88 |
| KRH58701 | Soybean | nucleus | 38.87 | 38.15 |
| CDY09599 | Canola | nucleus | 34.15 | 38.03 |
| KRH42599 | Soybean | nucleus | 38.49 | 37.78 |
| Bra032380.1-P | Field mustard | nucleus | 34.53 | 37.73 |
| CDY26269 | Canola | nucleus | 34.34 | 37.53 |
| CDX90244 | Canola | nucleus | 35.28 | 37.4 |
| PGSC0003DMT400031464 | Potato | nucleus | 36.6 | 37.38 |
| AT1G30320.1 | Thale cress | nucleus, plastid | 35.85 | 37.33 |
| CDY12047 | Canola | nucleus | 34.91 | 37.0 |
| KRH44798 | Soybean | nucleus | 38.3 | 36.84 |
| Solyc08g045640.2.1 | Tomato | mitochondrion | 32.83 | 35.22 |
| Bra010777.1-P | Field mustard | nucleus | 35.47 | 34.88 |
| HORVU0Hr1G040310.2 | Barley | cytosol, mitochondrion, nucleus | 29.81 | 30.74 |
| HORVU4Hr1G012760.3 | Barley | nucleus | 20.19 | 30.48 |
| HORVU5Hr1G009780.6 | Barley | cytosol | 27.74 | 30.37 |
| HORVU4Hr1G085140.6 | Barley | nucleus, plastid | 24.72 | 27.12 |
| HORVU2Hr1G039030.1 | Barley | cytosol, nucleus | 11.13 | 23.23 |
| HORVU2Hr1G084090.2 | Barley | plastid | 14.91 | 18.9 |
| HORVU7Hr1G100790.1 | Barley | nucleus | 9.62 | 18.35 |
| HORVU5Hr1G111120.3 | Barley | cytosol | 10.19 | 17.42 |
| CDY62474 | Canola | nucleus | 27.74 | 16.82 |
| CDY62472 | Canola | nucleus | 27.74 | 16.82 |
| HORVU5Hr1G111130.2 | Barley | cytosol, nucleus | 10.0 | 15.68 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G103570.7 | EnsemblPlantsGene:HORVU2Hr1G103570 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF17 |
| PFAM:PF03763 | SEG:seg | UniParc:UPI000B47FCA9 | UniProt:A0A287J8Y6 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr2H:+:700371876..700374173
Molecular Weight (calculated)
57284.2 Da
IEP (calculated)
8.610
GRAVY (calculated)
-0.682
Length
530 amino acids
Sequence
(BLAST)
(BLAST)
001: SLPPCPSQEI QAGALSPTKL RMKLLGAHNR VRVISSSSSR TSPSKNAEPS LAQNRLLVCD VLDQVSDSSG AAKCPAAVGN TEVVDKDPAV DSYKVQNMPK
101: SSVHQPAPSN SSMIHPVRTV EEDGNECDSG LDNASTSSFE FHGGEKTAAA QNPTAGYFSR QASSKWNDAE KWIVNKQTVQ QNTAKGTSQN QSAHQVNSAA
201: PRGGGVLPKH HGAFARPIQN MKRFNPASSA SRSILERLSF ASHQPKLVRH SDVCPDQGST ATSEYQKGPT ETSSTAIKPC NDIEAIPTVQ AVSVRDVGTE
301: MTPIPSQDPS RTGTPLGSVT PTRSPNCSIP STPVGGLSTA SIGEDNADDG PYFNRKGGTN EMSEDEIRLK ARKEIAALGV QLGKMNIASW ASKEELELVS
401: ATPSIADLER MKQEYATRAA AFEDAENSKH TARFKKEELK IEAWESRQRT KVESEMKRLE ERAEKMRSEA MARMAERLEL ARRVAEEKRA SANAKMNKQA
501: ARAVQKADLI RQTGRIPGSR ILCCGCFCEP
101: SSVHQPAPSN SSMIHPVRTV EEDGNECDSG LDNASTSSFE FHGGEKTAAA QNPTAGYFSR QASSKWNDAE KWIVNKQTVQ QNTAKGTSQN QSAHQVNSAA
201: PRGGGVLPKH HGAFARPIQN MKRFNPASSA SRSILERLSF ASHQPKLVRH SDVCPDQGST ATSEYQKGPT ETSSTAIKPC NDIEAIPTVQ AVSVRDVGTE
301: MTPIPSQDPS RTGTPLGSVT PTRSPNCSIP STPVGGLSTA SIGEDNADDG PYFNRKGGTN EMSEDEIRLK ARKEIAALGV QLGKMNIASW ASKEELELVS
401: ATPSIADLER MKQEYATRAA AFEDAENSKH TARFKKEELK IEAWESRQRT KVESEMKRLE ERAEKMRSEA MARMAERLEL ARRVAEEKRA SANAKMNKQA
501: ARAVQKADLI RQTGRIPGSR ILCCGCFCEP
001: MDYERIQKVQ KSIISPTKLR MKLMGPLNNM KREGSKSNSN SSRTSPSRLQ IPDDSEFSKN SLLASNSYSD DDVAATTTDI EVAKLPNEPV LYPTENDNQG
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8G3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.