Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G485700.1 | Wheat | nucleus, plastid | 97.15 | 96.78 |
| TraesCS2D01G464900.1 | Wheat | nucleus, plastid | 96.77 | 96.22 |
| HORVU2Hr1G103570.7 | Barley | nucleus, plastid | 94.3 | 93.58 |
| Os04t0620200-01 | Rice | nucleus, plastid | 77.57 | 76.69 |
| EES11442 | Sorghum | nucleus, plastid | 75.86 | 74.86 |
| Zm00001d002274_P001 | Maize | nucleus, plastid | 73.0 | 67.96 |
| VIT_10s0003g04090.t01 | Wine grape | nucleus | 42.97 | 42.97 |
| GSMUA_Achr5P26590_001 | Banana | nucleus | 39.92 | 41.26 |
| PGSC0003DMT400031464 | Potato | nucleus | 38.59 | 39.11 |
| CDY09599 | Canola | nucleus | 35.36 | 39.08 |
| Bra032380.1-P | Field mustard | nucleus | 35.55 | 38.56 |
| AT1G30320.1 | Thale cress | nucleus, plastid | 37.26 | 38.51 |
| CDY26269 | Canola | nucleus | 35.36 | 38.35 |
| KRH58701 | Soybean | nucleus | 39.35 | 38.33 |
| CDX90244 | Canola | nucleus | 36.31 | 38.2 |
| KRH42599 | Soybean | nucleus | 38.97 | 37.96 |
| CDY12047 | Canola | nucleus | 35.93 | 37.8 |
| KRH44798 | Soybean | nucleus | 38.97 | 37.21 |
| Solyc08g045640.2.1 | Tomato | mitochondrion | 34.79 | 37.04 |
| Bra010777.1-P | Field mustard | nucleus | 36.5 | 35.62 |
| TraesCS5A01G040500.1 | Wheat | nucleus | 29.09 | 34.08 |
| TraesCS5A01G517700.1 | Wheat | nucleus | 25.86 | 32.23 |
| TraesCS6A01G046400.1 | Wheat | nucleus | 30.42 | 31.5 |
| TraesCS4A01G238400.1 | Wheat | nucleus | 20.53 | 30.95 |
| TraesCS2A01G199300.1 | Wheat | nucleus | 13.31 | 22.51 |
| TraesCS7A01G443500.1 | Wheat | nucleus | 10.27 | 19.01 |
| TraesCS5A01G464900.1 | Wheat | nucleus | 10.84 | 18.51 |
| CDY62474 | Canola | nucleus | 29.28 | 17.62 |
| CDY62472 | Canola | nucleus | 29.28 | 17.62 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G464000.1 | EnsemblPlantsGene:TraesCS2A01G464000 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF17 |
| PFAM:PF03763 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr2A:+:709772723..709775761
Molecular Weight (calculated)
57223.0 Da
IEP (calculated)
8.681
GRAVY (calculated)
-0.723
Length
526 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYERIHKPQ AGALSPTKLR MKLLGAHNRV RVISSSSSRT SPSKNAEPSL AQNRLLVCDV LDEDSSGATK CPAAVSNTEV VDKDPAVDSY KVQNMPKSSV
101: HQPAPSNSSM IHPVRTVEED SNECDSGLDD ASTSSFEFHG GEKTAAQNPT AGYFSRQASS KWNDAEKWIV NKQTVQQNTA KGASQNQSAH QVNSAAPRGG
201: GIVPKHHGAF ARPIQNMKRF NPASSASRSI LERLSFASHQ PKLVRHADVC ADQGSSANSE YQKGQAETNS IAIKPCNDTE AISTVQAVSV RDVGTEMTPI
301: PSQDPSRTGT PLGSVTPTRS PNCSIPSTPV GGRSTASIGE DNADDGPYFN RKGGMNELSE DEIRLKARKE IAALGVQLGK MNIASWASKE ELELVSATPS
401: IADLERMKQE YATRAAAFED AENSKHTARF KKEELKIEAW ESRQRTKVES EMKKLEERAE KMRSEAMARM AERLELARRV AEEKRASANA KMNKQAARAV
501: QKADLIRQTG RIPGSRILCC GCFCEP
101: HQPAPSNSSM IHPVRTVEED SNECDSGLDD ASTSSFEFHG GEKTAAQNPT AGYFSRQASS KWNDAEKWIV NKQTVQQNTA KGASQNQSAH QVNSAAPRGG
201: GIVPKHHGAF ARPIQNMKRF NPASSASRSI LERLSFASHQ PKLVRHADVC ADQGSSANSE YQKGQAETNS IAIKPCNDTE AISTVQAVSV RDVGTEMTPI
301: PSQDPSRTGT PLGSVTPTRS PNCSIPSTPV GGRSTASIGE DNADDGPYFN RKGGMNELSE DEIRLKARKE IAALGVQLGK MNIASWASKE ELELVSATPS
401: IADLERMKQE YATRAAAFED AENSKHTARF KKEELKIEAW ESRQRTKVES EMKKLEERAE KMRSEAMARM AERLELARRV AEEKRASANA KMNKQAARAV
501: QKADLIRQTG RIPGSRILCC GCFCEP
001: MDYERIQKVQ KSIISPTKLR MKLMGPLNNM KREGSKSNSN SSRTSPSRLQ IPDDSEFSKN SLLASNSYSD DDVAATTTDI EVAKLPNEPV LYPTENDNQG
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8G3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.