Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G464000.1 | Wheat | nucleus, plastid | 96.78 | 97.15 |
| TraesCS2D01G464900.1 | Wheat | nucleus, plastid | 96.78 | 96.6 |
| HORVU2Hr1G103570.7 | Barley | nucleus, plastid | 93.75 | 93.4 |
| Os04t0620200-01 | Rice | nucleus, plastid | 77.46 | 76.88 |
| EES11442 | Sorghum | nucleus, plastid | 75.76 | 75.05 |
| Zm00001d002274_P001 | Maize | nucleus, plastid | 72.73 | 67.96 |
| VIT_10s0003g04090.t01 | Wine grape | nucleus | 43.37 | 43.54 |
| GSMUA_Achr5P26590_001 | Banana | nucleus | 39.58 | 41.06 |
| CDY09599 | Canola | nucleus | 35.61 | 39.5 |
| Bra032380.1-P | Field mustard | nucleus | 35.98 | 39.18 |
| CDY26269 | Canola | nucleus | 35.8 | 38.97 |
| PGSC0003DMT400031464 | Potato | nucleus | 38.26 | 38.92 |
| AT1G30320.1 | Thale cress | nucleus, plastid | 37.5 | 38.9 |
| KRH58701 | Soybean | nucleus | 39.58 | 38.7 |
| CDX90244 | Canola | nucleus | 36.55 | 38.6 |
| KRH42599 | Soybean | nucleus | 39.2 | 38.33 |
| CDY12047 | Canola | nucleus | 36.17 | 38.2 |
| KRH44798 | Soybean | nucleus | 39.02 | 37.39 |
| Solyc08g045640.2.1 | Tomato | mitochondrion | 34.28 | 36.64 |
| Bra010777.1-P | Field mustard | nucleus | 36.55 | 35.81 |
| TraesCS5B01G041700.1 | Wheat | mitochondrion, nucleus | 30.3 | 33.97 |
| TraesCS4B01G349100.1 | Wheat | nucleus | 26.33 | 32.78 |
| TraesCS6B01G062500.1 | Wheat | nucleus | 30.3 | 31.5 |
| TraesCS4B01G076500.1 | Wheat | nucleus | 20.08 | 29.94 |
| TraesCS2B01G226600.1 | Wheat | cytosol, nucleus, plastid | 12.5 | 21.43 |
| TraesCS2B01G363600.1 | Wheat | plastid | 15.34 | 19.61 |
| TraesCS7B01G342300.1 | Wheat | nucleus | 10.04 | 19.06 |
| TraesCS5B01G476700.1 | Wheat | nucleus | 10.61 | 18.3 |
| CDY62474 | Canola | nucleus | 29.36 | 17.73 |
| CDY62472 | Canola | nucleus | 29.36 | 17.73 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G485700.1 | EnsemblPlantsGene:TraesCS2B01G485700 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF17 |
| PFAM:PF03763 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr2B:+:683002069..683004931
Molecular Weight (calculated)
57394.1 Da
IEP (calculated)
8.820
GRAVY (calculated)
-0.735
Length
528 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYERIHKPQ AGALSPTKLR MKLLGAHNRV RVISSSSSRT SPSKNAEPSQ AQNRLLVCDV LDEVSDSSGA AKCPSAVSNT EVVDKDPAVD SYKVQNMSKG
101: SVHQPAPSNS SMIHPVRTVE EDSNECDSGL DNASTSSFEF HGGEKTAAQN PTAGYFSRQA SSKWNDAEKW IVNKQTVQQN TTKGASQNQS AHQVSSAAPR
201: GGGVVPKHHG AFARPIQNMK RFNPASSASR SILERLSFAS HQPKLVRHAD VCADQGSSAN SDYQKGQAET NSIAIKTCND TEAISTVQAV SVRDVGTEMT
301: PIPSQDPSRT GTPLGSVTPT RSPNCSIPST PVGGRSTASI GEDNADDGPY FNRKGSTNEM SEDEIRLKAR KEIAALGVQL GKMNIASWAS KEELELVSAT
401: PSIADLERMK QEYATRAAAF EDAENSKHTA RFKKEELKIE AWESRQRTKV ESEMKRLEER AEKMRSEAMA RMAERLELAR RVAEEKRASA NAKMNKQAAR
501: AVQKADLIRQ TGRIPGSRIL CCGCFCEP
101: SVHQPAPSNS SMIHPVRTVE EDSNECDSGL DNASTSSFEF HGGEKTAAQN PTAGYFSRQA SSKWNDAEKW IVNKQTVQQN TTKGASQNQS AHQVSSAAPR
201: GGGVVPKHHG AFARPIQNMK RFNPASSASR SILERLSFAS HQPKLVRHAD VCADQGSSAN SDYQKGQAET NSIAIKTCND TEAISTVQAV SVRDVGTEMT
301: PIPSQDPSRT GTPLGSVTPT RSPNCSIPST PVGGRSTASI GEDNADDGPY FNRKGSTNEM SEDEIRLKAR KEIAALGVQL GKMNIASWAS KEELELVSAT
401: PSIADLERMK QEYATRAAAF EDAENSKHTA RFKKEELKIE AWESRQRTKV ESEMKRLEER AEKMRSEAMA RMAERLELAR RVAEEKRASA NAKMNKQAAR
501: AVQKADLIRQ TGRIPGSRIL CCGCFCEP
001: MDYERIQKVQ KSIISPTKLR MKLMGPLNNM KREGSKSNSN SSRTSPSRLQ IPDDSEFSKN SLLASNSYSD DDVAATTTDI EVAKLPNEPV LYPTENDNQG
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8G3]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.