Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400031464 | Potato | nucleus | 68.06 | 68.98 |
| KRH58701 | Soybean | nucleus | 68.63 | 66.85 |
| KRH42599 | Soybean | nucleus | 68.06 | 66.3 |
| KRH44798 | Soybean | nucleus | 67.3 | 64.25 |
| AT1G30320.1 | Thale cress | nucleus, plastid | 58.56 | 60.51 |
| CDY09599 | Canola | nucleus | 54.18 | 59.87 |
| CDY12047 | Canola | nucleus | 55.89 | 58.8 |
| Solyc08g045640.2.1 | Tomato | mitochondrion | 55.13 | 58.7 |
| CDY26269 | Canola | nucleus | 53.8 | 58.35 |
| CDX90244 | Canola | nucleus | 55.13 | 58.0 |
| Bra032380.1-P | Field mustard | nucleus | 53.42 | 57.94 |
| Bra010777.1-P | Field mustard | nucleus | 54.75 | 53.43 |
| GSMUA_Achr10P... | Banana | nucleus | 48.86 | 47.42 |
| GSMUA_Achr5P26590_001 | Banana | nucleus | 42.97 | 44.4 |
| Os04t0620200-01 | Rice | nucleus, plastid | 44.11 | 43.61 |
| TraesCS2B01G485700.1 | Wheat | nucleus, plastid | 43.54 | 43.37 |
| TraesCS2D01G464900.1 | Wheat | nucleus, plastid | 43.54 | 43.29 |
| TraesCS2A01G464000.1 | Wheat | nucleus, plastid | 42.97 | 42.97 |
| Os12t0613600-01 | Rice | nucleus | 34.79 | 42.86 |
| EES11442 | Sorghum | nucleus, plastid | 42.97 | 42.4 |
| Zm00001d041496_P001 | Maize | nucleus | 30.04 | 41.47 |
| VIT_01s0010g01760.t01 | Wine grape | nucleus | 39.92 | 41.18 |
| HORVU2Hr1G103570.7 | Barley | nucleus, plastid | 41.44 | 41.13 |
| TraesCS5D01G047600.3 | Wheat | cytosol | 34.6 | 40.62 |
| TraesCS5A01G040500.1 | Wheat | nucleus | 34.22 | 40.09 |
| KXG23993 | Sorghum | nucleus | 34.98 | 40.0 |
| Zm00001d002274_P001 | Maize | nucleus, plastid | 42.97 | 40.0 |
| TraesCS5B01G041700.1 | Wheat | mitochondrion, nucleus | 34.22 | 38.22 |
| VIT_01s0010g02560.t01 | Wine grape | nucleus | 25.1 | 36.77 |
| HORVU5Hr1G009780.6 | Barley | cytosol | 30.61 | 33.26 |
| VIT_09s0002g00360.t01 | Wine grape | nucleus | 21.48 | 24.78 |
| VIT_08s0007g08280.t01 | Wine grape | nucleus | 11.6 | 22.51 |
Protein Annotations
| EntrezGene:100256651 | wikigene:100256651 | MapMan:35.2 | EMBL:AM435342 | ProteinID:CAN71634 | ProteinID:CAN71634.1 |
| ProteinID:CBI30948 | ProteinID:CBI30948.3 | ncoils:Coil | UniProt:D7TKC6 | EMBL:FN595992 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | EntrezGene:LOC100256651 | wikigene:LOC100256651 | PFAM:PF03763 |
| PANTHER:PTHR31471 | PANTHER:PTHR31471:SF17 | InterPro:Remorin_C | UniParc:UPI00019842F0 | ArrayExpress:VIT_10s0003g04090 | EnsemblPlantsGene:VIT_10s0003g04090 |
| EnsemblPlants:VIT_10s0003g04090.t01 | unigene:Vvi.9480 | RefSeq:XP_002272255 | RefSeq:XP_002272255.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr10:+:6940083..6943464
Molecular Weight (calculated)
58716.9 Da
IEP (calculated)
8.634
GRAVY (calculated)
-0.905
Length
526 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYERIHKVQ TGIISPSKLR MKLMGPHHQR KKDGSNSNSS RTSPSKLEDS EFVKNSLLAL EDEASSLEVS SVKLPGDVMP DLAQGDQISC QPKESLPREN
101: GSVGRVKTQQ YSKCDTGNSS TIHPVRTLEE ENLDYDSNAS SSSFEFHKER SLHNSVSRSL SRPMPSKWND AEKWIMNRQN AQANYTKKNV LQSQGNRLAG
201: ANMVRVAPES ASTDHKLSVK RVDFCQPAAQ MGLEKFSFVP NGAHPISAQA NGGNALIDLC QTKDLKEVDP RELSCLKGSP EDTTGFSAIR AVSMRDMGTE
301: MTPIPSQDPS RTATPVGATT PLRSPTSSLP STPRRAGAPA PTPAEHMTDD ESRDYRNREL SEEELKLKTR KEIVALGVQL GKMNIAAWAS KDEKEKSAQS
401: GETHDLEDHE RIEYERRAAA WEEAEKSKHA ARYKREEIKI QAWESQQKAK LEAEMRRIEA QVEQMRAHAQ AKMVKKIAMA RQRSEEKRAA AEANRNREAE
501: KTSAQAEYIR QTGRIPTSQF VCCGWL
101: GSVGRVKTQQ YSKCDTGNSS TIHPVRTLEE ENLDYDSNAS SSSFEFHKER SLHNSVSRSL SRPMPSKWND AEKWIMNRQN AQANYTKKNV LQSQGNRLAG
201: ANMVRVAPES ASTDHKLSVK RVDFCQPAAQ MGLEKFSFVP NGAHPISAQA NGGNALIDLC QTKDLKEVDP RELSCLKGSP EDTTGFSAIR AVSMRDMGTE
301: MTPIPSQDPS RTATPVGATT PLRSPTSSLP STPRRAGAPA PTPAEHMTDD ESRDYRNREL SEEELKLKTR KEIVALGVQL GKMNIAAWAS KDEKEKSAQS
401: GETHDLEDHE RIEYERRAAA WEEAEKSKHA ARYKREEIKI QAWESQQKAK LEAEMRRIEA QVEQMRAHAQ AKMVKKIAMA RQRSEEKRAA AEANRNREAE
501: KTSAQAEYIR QTGRIPTSQF VCCGWL
001: MDYERIQKVQ KSIISPTKLR MKLMGPLNNM KREGSKSNSN SSRTSPSRLQ IPDDSEFSKN SLLASNSYSD DDVAATTTDI EVAKLPNEPV LYPTENDNQG
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8G3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.