Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09599 | Canola | nucleus | 96.7 | 98.53 |
| Bra032380.1-P | Field mustard | nucleus | 96.91 | 96.91 |
| CDX90244 | Canola | nucleus | 82.27 | 79.8 |
| CDY12047 | Canola | nucleus | 81.86 | 79.4 |
| AT1G30320.1 | Thale cress | nucleus, plastid | 79.79 | 76.03 |
| VIT_10s0003g04090.t01 | Wine grape | nucleus | 58.35 | 53.8 |
| KRH42599 | Soybean | nucleus | 57.32 | 51.48 |
| KRH58701 | Soybean | nucleus | 57.11 | 51.3 |
| PGSC0003DMT400031464 | Potato | nucleus | 54.02 | 50.48 |
| KRH44798 | Soybean | nucleus | 56.91 | 50.09 |
| Solyc08g045640.2.1 | Tomato | mitochondrion | 46.6 | 45.75 |
| Os12t0613600-01 | Rice | nucleus | 34.23 | 38.88 |
| CDY09386 | Canola | nucleus | 31.96 | 38.65 |
| Zm00001d041496_P001 | Maize | nucleus | 30.31 | 38.58 |
| Os04t0620200-01 | Rice | nucleus, plastid | 41.65 | 37.97 |
| CDY15819 | Canola | nucleus | 34.43 | 37.78 |
| GSMUA_Achr5P26590_001 | Banana | nucleus | 39.38 | 37.52 |
| CDY17607 | Canola | nucleus | 34.23 | 37.39 |
| CDY03066 | Canola | nucleus | 30.72 | 36.97 |
| KXG23993 | Sorghum | nucleus | 35.05 | 36.96 |
| EES11442 | Sorghum | nucleus, plastid | 40.0 | 36.4 |
| TraesCS2B01G485700.1 | Wheat | nucleus, plastid | 38.97 | 35.8 |
| GSMUA_Achr10P... | Banana | nucleus | 39.79 | 35.61 |
| TraesCS2D01G464900.1 | Wheat | nucleus, plastid | 38.76 | 35.54 |
| TraesCS5A01G040500.1 | Wheat | nucleus | 32.78 | 35.41 |
| TraesCS2A01G464000.1 | Wheat | nucleus, plastid | 38.35 | 35.36 |
| TraesCS5D01G047600.3 | Wheat | cytosol | 32.58 | 35.27 |
| CDY32543 | Canola | nucleus | 25.36 | 34.84 |
| HORVU2Hr1G103570.7 | Barley | nucleus, plastid | 37.53 | 34.34 |
| Zm00001d002274_P001 | Maize | nucleus, plastid | 40.0 | 34.34 |
| CDY12657 | Canola | cytosol | 24.95 | 34.28 |
| CDY01823 | Canola | nucleus | 24.95 | 34.18 |
| TraesCS5B01G041700.1 | Wheat | mitochondrion, nucleus | 32.78 | 33.76 |
| CDX96080 | Canola | nucleus | 24.54 | 33.52 |
| HORVU5Hr1G009780.6 | Barley | cytosol | 30.31 | 30.37 |
| CDY62474 | Canola | nucleus | 50.1 | 27.8 |
| CDY62472 | Canola | nucleus | 50.1 | 27.8 |
| CDY08209 | Canola | nucleus | 18.56 | 21.48 |
| CDY68168 | Canola | nucleus | 18.56 | 21.48 |
| CDX79905 | Canola | nucleus | 10.93 | 19.7 |
| CDY48774 | Canola | nucleus | 10.72 | 19.26 |
| CDX72021 | Canola | nucleus | 10.52 | 18.75 |
| CDY06095 | Canola | nucleus | 10.52 | 17.41 |
| CDY36609 | Canola | cytosol | 20.0 | 15.09 |
| CDY24070 | Canola | extracellular | 20.41 | 13.52 |
Protein Annotations
| EnsemblPlants:CDY26269 | EnsemblPlantsGene:GSBRNA2T00034944001 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF17 |
| PFAM:PF03763 | ProteinID:CDY26269 | ProteinID:CDY26269.1 | SEG:seg | UniParc:UPI0004EDE496 | UniProt:A0A078GM02 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA09g26200DBnaA09g26200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GM02]
Coordinates
chrLK032187:-:8598..11388
Molecular Weight (calculated)
54258.3 Da
IEP (calculated)
8.563
GRAVY (calculated)
-1.001
Length
485 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYERIEKVQ KSMISPTKLR MKLMGPHNNK KKEGSSNNSS RTSPVRLQVS DDTEFSKNSL LASKSDTDED DHVAASATYI EVAKLPNAPV LDLTESSNQG
101: GMRETDQARP QQLKKADLSI TLRPQEDENL DYDSNASSSS FEFHGGVRGG ERSAQSHASR AYPWRQVPSK WSDAEKWILS RQNMMMRKNG QGNRMPVRVV
201: PDNTGYEHTK SRMDPCQSSQ AEGFETFPNL VPTAPHPILT KASSHDNTTA GPAIRSVCMR DMGTEMTPIP SQEPSRSVTP VDATTPLRSP TSSLPSTPRG
301: GKQVESSVSQ DPSKNTRRDL SEEEMKARTR REIVALGVQL GKTNIAAWAS KEEEENNNNN VDAEETQRVE FDKRASAWEE AEKSKHNARY KREEIRIQAW
401: ESQEKAKLEA EMRRIEAKVQ QMKAEAEAKI VKKIAMAKQR SEEKRAAAEA RKARDAEKAA AEAEYIRETG QIPASSYKIC CGWLS
101: GMRETDQARP QQLKKADLSI TLRPQEDENL DYDSNASSSS FEFHGGVRGG ERSAQSHASR AYPWRQVPSK WSDAEKWILS RQNMMMRKNG QGNRMPVRVV
201: PDNTGYEHTK SRMDPCQSSQ AEGFETFPNL VPTAPHPILT KASSHDNTTA GPAIRSVCMR DMGTEMTPIP SQEPSRSVTP VDATTPLRSP TSSLPSTPRG
301: GKQVESSVSQ DPSKNTRRDL SEEEMKARTR REIVALGVQL GKTNIAAWAS KEEEENNNNN VDAEETQRVE FDKRASAWEE AEKSKHNARY KREEIRIQAW
401: ESQEKAKLEA EMRRIEAKVQ QMKAEAEAKI VKKIAMAKQR SEEKRAAAEA RKARDAEKAA AEAEYIRETG QIPASSYKIC CGWLS
001: MDYERIQKVQ KSIISPTKLR MKLMGPLNNM KREGSKSNSN SSRTSPSRLQ IPDDSEFSKN SLLASNSYSD DDVAATTTDI EVAKLPNEPV LYPTENDNQG
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8G3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.