Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH42599 | Soybean | nucleus | 95.46 | 97.41 |
| KRH58701 | Soybean | nucleus | 91.65 | 93.52 |
| VIT_10s0003g04090.t01 | Wine grape | nucleus | 64.25 | 67.3 |
| PGSC0003DMT400031464 | Potato | nucleus | 58.08 | 61.66 |
| CDY09599 | Canola | nucleus | 50.64 | 58.61 |
| AT1G30320.1 | Thale cress | nucleus, plastid | 52.63 | 56.97 |
| Bra032380.1-P | Field mustard | nucleus | 50.09 | 56.91 |
| CDY26269 | Canola | nucleus | 50.09 | 56.91 |
| CDX90244 | Canola | nucleus | 51.54 | 56.8 |
| CDY12047 | Canola | nucleus | 51.54 | 56.8 |
| Solyc08g045640.2.1 | Tomato | mitochondrion | 48.82 | 54.45 |
| Bra010777.1-P | Field mustard | nucleus | 50.27 | 51.39 |
| GSMUA_Achr5P26590_001 | Banana | nucleus | 40.29 | 43.61 |
| GSMUA_Achr10P... | Banana | nucleus | 42.65 | 43.36 |
| Os12t0613600-01 | Rice | nucleus | 33.58 | 43.33 |
| Os04t0620200-01 | Rice | nucleus, plastid | 40.65 | 42.11 |
| Zm00001d041496_P001 | Maize | nucleus | 28.49 | 41.21 |
| TraesCS5D01G047600.3 | Wheat | cytosol | 32.67 | 40.18 |
| KXG23993 | Sorghum | nucleus | 33.39 | 40.0 |
| KRH58560 | Soybean | nucleus | 36.3 | 39.45 |
| EES11442 | Sorghum | nucleus, plastid | 38.11 | 39.4 |
| TraesCS5A01G040500.1 | Wheat | nucleus | 31.94 | 39.2 |
| TraesCS2D01G464900.1 | Wheat | nucleus, plastid | 37.57 | 39.13 |
| KRH42459 | Soybean | nucleus | 36.12 | 39.02 |
| TraesCS2B01G485700.1 | Wheat | nucleus, plastid | 37.39 | 39.02 |
| TraesCS2A01G464000.1 | Wheat | nucleus, plastid | 37.21 | 38.97 |
| TraesCS5B01G041700.1 | Wheat | mitochondrion, nucleus | 32.85 | 38.43 |
| HORVU2Hr1G103570.7 | Barley | nucleus, plastid | 36.84 | 38.3 |
| Zm00001d002274_P001 | Maize | nucleus, plastid | 38.29 | 37.35 |
| HORVU5Hr1G009780.6 | Barley | cytosol | 28.49 | 32.44 |
| KRH58742 | Soybean | nucleus | 20.33 | 30.52 |
| KRH42640 | Soybean | nucleus | 19.78 | 29.7 |
| KRH06283 | Soybean | cytosol | 19.6 | 22.83 |
| KRH47718 | Soybean | nucleus | 19.24 | 22.6 |
| KRG95278 | Soybean | nucleus | 10.89 | 22.14 |
| KRH33097 | Soybean | nucleus | 10.34 | 19.26 |
| KRH66963 | Soybean | nucleus | 7.8 | 19.11 |
| KRH71974 | Soybean | nucleus | 10.16 | 18.73 |
Protein Annotations
| EMBL:ACUP02004962 | EnsemblPlants:KRH44798 | EnsemblPlantsGene:GLYMA_08G231800 | EntrezGene:100790482 | InterPro:Remorin_C | ncoils:Coil |
| PANTHER:PTHR31471 | PANTHER:PTHR31471:SF17 | PFAM:PF03763 | ProteinID:KRH44798 | ProteinID:KRH44798.1 | SEG:seg |
| UniParc:UPI0002959208 | UniProt:I1KW15 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:19052947..19056842
Molecular Weight (calculated)
61779.6 Da
IEP (calculated)
9.387
GRAVY (calculated)
-0.907
Length
551 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYERIEKVQ AGIISPSKLR MKLLGPLHHR KKDGSNSNSS RTSPSRIEDA EFVNSLLGSK NDNLDDEGLQ FQLQFNNFFT SPSLDVLSLK PSSDAVLDRR
101: QNGQISYEAK ETMAKENSNT GRVKMQHFQK VDTGNSSAIH AVRAIEDENL DYDSNASSSS FEFDKGERPG NNPATRSLFR PIPSKWNDAE KWIMNRQNIQ
201: ANHSKKNTAH NQANRMPTNM GRVAPESGNY DHKLPIGKAT ETKRVDICQT TSYMGFEKFS FVPSDAHSVS GQAHGRNPVV ESLPQSKDLK DVNELGLSCS
301: RSTDDQSVMP GIRSVAMRDM GTEMTPVPSQ EPSRTATPVG SATPLRSPVS SMPSTPRRGA PAPTPLDNTT NEDSQFPVEN GKRHLSEEEM KIKTRREIAA
401: LGVQLGKMNI AAWASKDEQE KNKSSPRDVS VLEQERIEFE KRAALWEEAE KSKHTARFKR EEIKIQAWES QQKAKLEAEM GRIEAKVEQM RAQTHAKMVK
501: KIAMARQRLE EKCAAAEARK NREAERTAAQ TEYIRQTGRL PSSNYICCGW L
101: QNGQISYEAK ETMAKENSNT GRVKMQHFQK VDTGNSSAIH AVRAIEDENL DYDSNASSSS FEFDKGERPG NNPATRSLFR PIPSKWNDAE KWIMNRQNIQ
201: ANHSKKNTAH NQANRMPTNM GRVAPESGNY DHKLPIGKAT ETKRVDICQT TSYMGFEKFS FVPSDAHSVS GQAHGRNPVV ESLPQSKDLK DVNELGLSCS
301: RSTDDQSVMP GIRSVAMRDM GTEMTPVPSQ EPSRTATPVG SATPLRSPVS SMPSTPRRGA PAPTPLDNTT NEDSQFPVEN GKRHLSEEEM KIKTRREIAA
401: LGVQLGKMNI AAWASKDEQE KNKSSPRDVS VLEQERIEFE KRAALWEEAE KSKHTARFKR EEIKIQAWES QQKAKLEAEM GRIEAKVEQM RAQTHAKMVK
501: KIAMARQRLE EKCAAAEARK NREAERTAAQ TEYIRQTGRL PSSNYICCGW L
001: MDYERIQKVQ KSIISPTKLR MKLMGPLNNM KREGSKSNSN SSRTSPSRLQ IPDDSEFSKN SLLASNSYSD DDVAATTTDI EVAKLPNEPV LYPTENDNQG
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8G3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.