CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58560	Soybean	nucleus	94.51	95.07
VIT_01s0010g01760.t01	Wine grape	nucleus	72.35	72.35
Bra026612.1-P	Field mustard	nucleus	55.29	67.95
CDY09386	Canola	nucleus	52.16	66.33
CDY15819	Canola	nucleus	56.08	64.71
Bra024828.1-P	Field mustard	nucleus	56.86	64.44
CDY17607	Canola	nucleus	56.08	64.41
CDY03066	Canola	nucleus	50.59	64.02
AT2G02170.2	Thale cress	nucleus	60.78	63.79
Solyc01g008180.2.1	Tomato	nucleus	61.37	59.96
GSMUA_Achr5P11780_001	Banana	cytosol	37.65	59.44
GSMUA_Achr1P02030_001	Banana	nucleus	56.08	58.37
GSMUA_Achr11P...	Banana	nucleus	54.9	57.03
Os02t0116800-01	Rice	nucleus	53.33	53.33
TraesCS6D01G053500.1	Wheat	nucleus	52.75	52.85
TraesCS6A01G046400.1	Wheat	nucleus	52.35	52.56
GSMUA_Achr2P10980_001	Banana	nucleus	43.33	52.49
TraesCS6B01G062500.1	Wheat	nucleus	52.16	52.36
HORVU0Hr1G040310.2	Barley	cytosol, mitochondrion, nucleus	52.35	51.95
Os03t0120200-01	Rice	nucleus	42.16	50.83
Zm00001d054034_P001	Maize	nucleus	52.94	49.0
GSMUA_Achr5P19220_001	Banana	nucleus	40.2	48.46
EES06158	Sorghum	nucleus, plastid	53.92	48.25
TraesCS4B01G349100.1	Wheat	nucleus	40.0	48.11
TraesCS5A01G517700.1	Wheat	nucleus	39.8	48.1
TraesCS4D01G343800.1	Wheat	nucleus	39.8	48.1
KXG40319	Sorghum	nucleus	39.8	47.88
Zm00001d027403_P001	Maize	nucleus	39.22	47.17
Zm00001d048481_P001	Maize	cytosol, mitochondrion, nucleus	38.82	47.03
HORVU4Hr1G085140.6	Barley	nucleus, plastid	38.63	40.79
KRH58701	Soybean	nucleus	39.22	37.04
KRH42599	Soybean	nucleus	39.02	36.85
KRH44798	Soybean	nucleus	39.02	36.12
KRH42640	Soybean	nucleus	25.69	35.69
KRH58742	Soybean	nucleus	25.1	34.88
KRH47718	Soybean	nucleus	25.49	27.72
KRH06283	Soybean	cytosol	25.29	27.27
KRG95278	Soybean	nucleus	13.14	24.72
KRH33097	Soybean	nucleus	13.73	23.65
KRH71974	Soybean	nucleus	13.73	23.41
KRH66963	Soybean	nucleus	8.63	19.56

Protein Annotations

EMBL:ACUP02004804	EnsemblPlants:KRH42459	EnsemblPlantsGene:GLYMA_08G090800	EntrezGene:100787310	InterPro:Remorin_C	ncoils:Coil
PANTHER:PTHR31471	PANTHER:PTHR31471:SF1	PFAM:PF03763	ProteinID:KRH42459	ProteinID:KRH42459.1	SEG:seg
UniParc:UPI0002337CCA	UniProt:K7L5P1	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:6829918..6836624

Molecular Weight (calculated)

56228.8 Da

IEP (calculated)

8.447

GRAVY (calculated)

-0.848

Length

510 amino acids

Sequence
(BLAST)

001: MDYERIQKPQ GGGGFSPGKL RSMLLGVEKK RKEEEELDST FTTRSQNSDM DESGGSSSDH CKDVDVVSVL PEYSTSAIVR TSSVEAVGGD RFVKANAGVN
101: SRSRILEDPS SDYDSGHDNM SMSSSMFEFQ KAERAPQRVP VGPFSKPAPS KWDDAQKWIA SPTSNRPKTV QSQGQGGQSG HVGPRKVGSL GYGSRQSSMK
201: VVVEVPDQKE IALDEPDTKQ IDTDQTKMET GGQKFVSWEA DPYAIASSCV SLSQHNSSLA IQNETTFVPP PSTARSVSMR DMGTEMTPIA SQEPSRTGTP
301: VRATTPMRSP NSSRPSTPPR ASPASTLTDL HSDNLNLNMN ELSEKELQMK TRREIMVLGT QLGKMSIAAW ASKEEEDKDA STSLKTKTEP PKSVVVARAA
401: AWEEAEKAKY MARFRREEMK IQAWENHQKA KTEAKMKKIE VEVERIRGKA HDKLMNKLAA ARHKAEEKRA AAEANRNHQA AKTEEQAEYI RRTGHVPSSY
501: LSFSCCNWCS

Best Arabidopsis Sequence Match ( AT2G02170.4 )
(BLAST)

001: MDYERIGKTQ VTSSGGGFSP GKLRSMLLLG VDRKKNEEEE STPTMRSGSN QIDDPRVYVA SGLDDCKDVD VVSEITDCST SGIARSISLG LQEYSDYDNV
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS

Arabidopsis Description

At2g02170/F5O4.6 [Source:UniProtKB/TrEMBL;Acc:Q9ZUM1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.