Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG40319 | Sorghum | nucleus | 90.02 | 89.39 |
| Zm00001d027403_P001 | Maize | nucleus | 88.6 | 87.97 |
| Os03t0120200-01 | Rice | nucleus | 77.91 | 77.54 |
| TraesCS4D01G343800.1 | Wheat | nucleus | 74.58 | 74.41 |
| TraesCS5A01G517700.1 | Wheat | nucleus | 74.35 | 74.17 |
| TraesCS4B01G349100.1 | Wheat | nucleus | 74.58 | 74.06 |
| HORVU4Hr1G085140.6 | Barley | nucleus, plastid | 73.16 | 63.77 |
| GSMUA_Achr5P11780_001 | Banana | cytosol | 34.68 | 45.2 |
| GSMUA_Achr1P02030_001 | Banana | nucleus | 51.31 | 44.08 |
| GSMUA_Achr11P... | Banana | nucleus | 49.64 | 42.57 |
| Bra026612.1-P | Field mustard | nucleus | 40.62 | 41.2 |
| VIT_01s0010g01760.t01 | Wine grape | nucleus | 49.64 | 40.98 |
| GSMUA_Achr2P10980_001 | Banana | nucleus | 40.86 | 40.86 |
| CDY09386 | Canola | nucleus | 38.72 | 40.65 |
| CDY15819 | Canola | nucleus | 41.57 | 39.59 |
| KRH58560 | Soybean | nucleus | 47.27 | 39.25 |
| CDY03066 | Canola | nucleus | 37.53 | 39.21 |
| KRH42459 | Soybean | nucleus | 47.03 | 38.82 |
| CDY17607 | Canola | nucleus | 39.67 | 37.61 |
| Zm00001d054034_P001 | Maize | nucleus | 48.93 | 37.39 |
| Bra024828.1-P | Field mustard | nucleus | 39.67 | 37.11 |
| AT2G02170.2 | Thale cress | nucleus | 42.52 | 36.83 |
| GSMUA_Achr5P19220_001 | Banana | nucleus | 36.1 | 35.93 |
| Solyc01g008180.2.1 | Tomato | nucleus | 43.94 | 35.44 |
| Zm00001d041496_P001 | Maize | nucleus | 30.64 | 33.86 |
| Zm00001d050790_P003 | Maize | nucleus | 24.23 | 30.09 |
| Zm00001d051005_P001 | Maize | mitochondrion, nucleus | 20.67 | 27.97 |
| Zm00001d006626_P001 | Maize | nucleus | 15.68 | 25.29 |
| Zm00001d002274_P001 | Maize | nucleus, plastid | 32.07 | 23.89 |
| Zm00001d034558_P001 | Maize | nucleus | 14.49 | 23.46 |
| Zm00001d021839_P001 | Maize | nucleus | 15.68 | 22.45 |
| Zm00001d048829_P001 | Maize | plastid | 19.24 | 17.61 |
Protein Annotations
| EMBL:BT067076 | EnsemblPlants:Zm00001d048481_P001 | EnsemblPlants:Zm00001d048481_T001 | EnsemblPlantsGene:Zm00001d048481 | EntrezGene:100383385 | InterPro:Remorin_C |
| ncoils:Coil | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF18 | PFAM:PF03763 | ProteinID:AQL09899.1 | SEG:seg |
| UniParc:UPI000195CA1D | UniProt:C0PFK7 | MapMan:35.2 | : | : | : |
Description
Remorin family protein
Coordinates
chr9:+:157030533..157034917
Molecular Weight (calculated)
46158.7 Da
IEP (calculated)
8.471
GRAVY (calculated)
-0.887
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYERIHGPL PRHQSGGFSP AKLRAMLRGI EKRQRNNGED SSPEANDSGE LDDRRSLECS TSTEMSSNSG HRSRNRAPDD DSFDSESSSS GPPTVKRSAA
101: VAALLPPFSR PTPSKWDDAE KWISSPTSNR TGRTGPTAGA VPKKSALAFP DYGGRPPAVA KVVADVPTNA GPDGLAHPDL LKPGHNASVV VDGTAPAVRS
201: VCMRDMGTEM TPIASQEPSR TATPIIASSP TSSRTPTPQR TAEFSVSNID PKKIEMPEEE EVQMSTRQEI MDLGERLGKT TIAAWASKEE KSAARFTDTT
301: AYKAADIGRE NRAADWQETE KAKYLARFQR EEAKIQAWEN LQKAKIEAEM KGIEAKIERK RAREQDRLAS KLAAVSHRAE AKRETAEARR NQEAARTEEQ
401: AARIRYTGHT PSSFSCWCWC P
101: VAALLPPFSR PTPSKWDDAE KWISSPTSNR TGRTGPTAGA VPKKSALAFP DYGGRPPAVA KVVADVPTNA GPDGLAHPDL LKPGHNASVV VDGTAPAVRS
201: VCMRDMGTEM TPIASQEPSR TATPIIASSP TSSRTPTPQR TAEFSVSNID PKKIEMPEEE EVQMSTRQEI MDLGERLGKT TIAAWASKEE KSAARFTDTT
301: AYKAADIGRE NRAADWQETE KAKYLARFQR EEAKIQAWEN LQKAKIEAEM KGIEAKIERK RAREQDRLAS KLAAVSHRAE AKRETAEARR NQEAARTEEQ
401: AARIRYTGHT PSSFSCWCWC P
001: MDYERIGKTQ VTSSGGGFSP GKLRSMLLLG VDRKKNEEEE STPTMRSGSN QIDDPRVYVA SGLDDCKDVD VVSEITDCST SGIARSISLG LQEYSDYDNV
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS
Arabidopsis Description
At2g02170/F5O4.6 [Source:UniProtKB/TrEMBL;Acc:Q9ZUM1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.