Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH42459 | Soybean | nucleus | 95.07 | 94.51 |
| VIT_01s0010g01760.t01 | Wine grape | nucleus | 71.99 | 71.57 |
| Bra026612.1-P | Field mustard | nucleus | 55.62 | 67.95 |
| CDY09386 | Canola | nucleus | 52.27 | 66.08 |
| Bra024828.1-P | Field mustard | nucleus | 57.4 | 64.67 |
| CDY17607 | Canola | nucleus | 56.61 | 64.64 |
| CDY15819 | Canola | nucleus | 56.21 | 64.48 |
| CDY03066 | Canola | nucleus | 50.89 | 64.02 |
| AT2G02170.2 | Thale cress | nucleus | 61.34 | 63.99 |
| Solyc01g008180.2.1 | Tomato | nucleus | 61.34 | 59.58 |
| GSMUA_Achr5P11780_001 | Banana | cytosol | 37.28 | 58.51 |
| GSMUA_Achr1P02030_001 | Banana | nucleus | 56.02 | 57.96 |
| GSMUA_Achr11P... | Banana | nucleus | 54.64 | 56.42 |
| Os02t0116800-01 | Rice | nucleus | 53.25 | 52.94 |
| TraesCS6D01G053500.1 | Wheat | nucleus | 52.86 | 52.65 |
| GSMUA_Achr2P10980_001 | Banana | nucleus | 43.59 | 52.49 |
| TraesCS6A01G046400.1 | Wheat | nucleus | 52.47 | 52.36 |
| TraesCS6B01G062500.1 | Wheat | nucleus | 52.27 | 52.17 |
| HORVU0Hr1G040310.2 | Barley | cytosol, mitochondrion, nucleus | 52.47 | 51.75 |
| Os03t0120200-01 | Rice | nucleus | 42.01 | 50.35 |
| Zm00001d054034_P001 | Maize | nucleus | 52.66 | 48.46 |
| KXG40319 | Sorghum | nucleus | 40.24 | 48.11 |
| EES06158 | Sorghum | nucleus, plastid | 53.85 | 47.89 |
| Zm00001d027403_P001 | Maize | nucleus | 40.04 | 47.88 |
| GSMUA_Achr5P19220_001 | Banana | nucleus | 39.65 | 47.52 |
| TraesCS4B01G349100.1 | Wheat | nucleus | 39.65 | 47.41 |
| Zm00001d048481_P001 | Maize | cytosol, mitochondrion, nucleus | 39.25 | 47.27 |
| TraesCS4D01G343800.1 | Wheat | nucleus | 39.25 | 47.16 |
| TraesCS5A01G517700.1 | Wheat | nucleus | 39.05 | 46.92 |
| HORVU4Hr1G085140.6 | Barley | nucleus, plastid | 37.87 | 39.75 |
| KRH58701 | Soybean | nucleus | 39.84 | 37.41 |
| KRH42599 | Soybean | nucleus | 39.65 | 37.22 |
| KRH44798 | Soybean | nucleus | 39.45 | 36.3 |
| KRH42640 | Soybean | nucleus | 26.04 | 35.97 |
| KRH58742 | Soybean | nucleus | 25.25 | 34.88 |
| KRH47718 | Soybean | nucleus | 25.44 | 27.51 |
| KRH06283 | Soybean | cytosol | 25.44 | 27.27 |
| KRG95278 | Soybean | nucleus | 12.82 | 23.99 |
| KRH33097 | Soybean | nucleus | 13.61 | 23.31 |
| KRH71974 | Soybean | nucleus | 13.61 | 23.08 |
| KRH66963 | Soybean | nucleus | 8.48 | 19.11 |
Protein Annotations
| EMBL:ACUP02003269 | EnsemblPlants:KRH58560 | EnsemblPlantsGene:GLYMA_05G135700 | EntrezGene:100810593 | InterPro:Remorin_C | ncoils:Coil |
| PANTHER:PTHR31471 | PANTHER:PTHR31471:SF1 | PFAM:PF03763 | ProteinID:KRH58560 | ProteinID:KRH58560.1 | SEG:seg |
| UniParc:UPI00023393D4 | UniProt:K7KQ23 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:32795646..32806894
Molecular Weight (calculated)
55982.5 Da
IEP (calculated)
8.445
GRAVY (calculated)
-0.843
Length
507 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYERIQKPQ GVGGFSPGKL RSMLLGVEKK RKEEEELDST LTTRSQNSDM DESGGSSSDH CKDVDVVSVL PDYSTSAIVR TSSIEAVGGD RFVKANAAVN
101: SRNRVLEDPS SDYDSGHDNM SMSSSMFEFQ KAERAPQRVP VGPFSKPAPS KWDDAQKWIA SPTSNRPKTA QTQGQGGHAG PRKAGSLGYG SRQSSMKVVV
201: EVPDQKEIAL DEPDTKKIDT NQTKMDSGGQ KFVSWEADPY AIASFCVSLS QHNLSLAIQN ETTFVPPPST ARSVSMRDMG TEMTPIASQE PSRTGTPVRA
301: TTPMRSPNSS RPSTPPRASP ASTLTDLHSD NLNLNMNELS EKELQMKTRR EIMVLGTQLG KMNIAAWASK EEEDKDASTS LKTKAELPKS VVEARAAAWE
401: EAEKAKYMAR FRREEMKIQA WENHQKAKTE AKMRKIEVEV ERIQGKAQDK LTNKLAAARH KAEEKRAAAE ANRNHQAAKT EEQAEYIRRT GHVPSSYLSF
501: SCCNWCS
101: SRNRVLEDPS SDYDSGHDNM SMSSSMFEFQ KAERAPQRVP VGPFSKPAPS KWDDAQKWIA SPTSNRPKTA QTQGQGGHAG PRKAGSLGYG SRQSSMKVVV
201: EVPDQKEIAL DEPDTKKIDT NQTKMDSGGQ KFVSWEADPY AIASFCVSLS QHNLSLAIQN ETTFVPPPST ARSVSMRDMG TEMTPIASQE PSRTGTPVRA
301: TTPMRSPNSS RPSTPPRASP ASTLTDLHSD NLNLNMNELS EKELQMKTRR EIMVLGTQLG KMNIAAWASK EEEDKDASTS LKTKAELPKS VVEARAAAWE
401: EAEKAKYMAR FRREEMKIQA WENHQKAKTE AKMRKIEVEV ERIQGKAQDK LTNKLAAARH KAEEKRAAAE ANRNHQAAKT EEQAEYIRRT GHVPSSYLSF
501: SCCNWCS
001: MDYERIGKTQ VTSSGGGFSP GKLRSMLLLG VDRKKNEEEE STPTMRSGSN QIDDPRVYVA SGLDDCKDVD VVSEITDCST SGIARSISLG LQEYSDYDNV
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS
Arabidopsis Description
At2g02170/F5O4.6 [Source:UniProtKB/TrEMBL;Acc:Q9ZUM1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.