Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P11780_001 | Banana | cytosol | 53.06 | 80.5 |
| GSMUA_Achr2P10980_001 | Banana | nucleus | 63.27 | 73.63 |
| GSMUA_Achr11P... | Banana | nucleus | 71.43 | 71.28 |
| VIT_01s0010g01760.t01 | Wine grape | nucleus | 63.06 | 60.59 |
| CDY09386 | Canola | nucleus | 48.98 | 59.85 |
| Bra026612.1-P | Field mustard | nucleus | 49.59 | 58.55 |
| CDY15819 | Canola | nucleus | 51.43 | 57.01 |
| Os02t0116800-01 | Rice | nucleus | 58.98 | 56.67 |
| KRH42459 | Soybean | nucleus | 58.37 | 56.08 |
| KRH58560 | Soybean | nucleus | 57.96 | 56.02 |
| CDY17607 | Canola | nucleus | 50.41 | 55.63 |
| TraesCS6D01G053500.1 | Wheat | nucleus | 57.76 | 55.6 |
| Os03t0120200-01 | Rice | nucleus | 47.96 | 55.56 |
| TraesCS6B01G062500.1 | Wheat | nucleus | 57.55 | 55.51 |
| TraesCS6A01G046400.1 | Wheat | nucleus | 57.35 | 55.31 |
| Bra024828.1-P | Field mustard | nucleus | 50.61 | 55.11 |
| CDY03066 | Canola | nucleus | 45.1 | 54.84 |
| HORVU0Hr1G040310.2 | Barley | cytosol, mitochondrion, nucleus | 57.14 | 54.47 |
| GSMUA_Achr5P19220_001 | Banana | nucleus | 46.73 | 54.14 |
| AT2G02170.2 | Thale cress | nucleus | 53.06 | 53.5 |
| KXG40319 | Sorghum | nucleus | 45.92 | 53.07 |
| Zm00001d027403_P001 | Maize | nucleus | 45.31 | 52.36 |
| TraesCS4D01G343800.1 | Wheat | nucleus | 44.29 | 51.42 |
| Zm00001d048481_P001 | Maize | cytosol, mitochondrion, nucleus | 44.08 | 51.31 |
| TraesCS5A01G517700.1 | Wheat | nucleus | 44.08 | 51.18 |
| Solyc01g008180.2.1 | Tomato | nucleus | 54.29 | 50.96 |
| TraesCS4B01G349100.1 | Wheat | nucleus | 43.88 | 50.71 |
| Zm00001d054034_P001 | Maize | nucleus | 55.71 | 49.55 |
| EES06158 | Sorghum | nucleus, plastid | 57.55 | 49.47 |
| HORVU4Hr1G085140.6 | Barley | nucleus, plastid | 42.45 | 43.06 |
| GSMUA_Achr9P07790_001 | Banana | nucleus | 24.29 | 37.9 |
| GSMUA_Achr3P17060_001 | Banana | nucleus | 25.92 | 36.81 |
| GSMUA_Achr10P... | Banana | nucleus | 36.12 | 32.66 |
| GSMUA_Achr5P26590_001 | Banana | nucleus | 31.63 | 30.45 |
| GSMUA_Achr6P00160_001 | Banana | nucleus | 15.51 | 28.04 |
| GSMUA_Achr4P33120_001 | Banana | nucleus | 14.69 | 26.47 |
| GSMUA_Achr2P13770_001 | Banana | cytosol, nucleus, plastid | 14.69 | 25.71 |
| GSMUA_Achr10P... | Banana | nucleus | 22.24 | 24.22 |
| GSMUA_Achr2P07310_001 | Banana | nucleus | 21.43 | 21.08 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P02030_001 | EnsemblPlants:GSMUA_Achr1T02030_001 | EnsemblPlantsGene:GSMUA_Achr1G02030_001 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 |
| PANTHER:PTHR31471:SF18 | PFAM:PF03763 | SEG:seg | UniParc:UPI000296B9CC | UniProt:M0RWB1 | MapMan:35.2 |
Description
remorin family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G02030_001]
Coordinates
chr1:+:1660035..1665416
Molecular Weight (calculated)
54128.3 Da
IEP (calculated)
8.570
GRAVY (calculated)
-0.786
Length
490 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYERIHKPF GGFSPKKLRA MLLGVEKRRK EEEELESKTS LRSEPSEFDD GRASAADSCK DVECSTSSEM ASGHRSRDHA MGFPRVKSQE EDSFEAENVS
101: SGFEFQKAER TPPHRLTAAA AFVPPFSKPA PSKWDDAQKW IASPTSNRGG SKAGGGQARR GGLAGYVSRQ AAAKVVLNVV EEADTKRVDG SQAKKEISGI
201: KSVNWVGEPH PRLDLGVKPT VVVENPVVDS AVNLSWHDSS TSIQSATAFM TPAPTVRSVS MRDMGTEMTP IASQEPSRTG TPAGATSPLY SPTSSRPATP
301: QRRAPVSTQT DSADCHDDLN DKEMSEKELQ RKTRREIMVL GQKLGKTNIA AWASKEEDTD ASISTMTVSK DQPDKSVIEV RAAAWEEAEK TKYLARFKRE
401: EIKIQAWENH QKATIEAEMR KIEVEVERMR ACAHEKLMNQ LAAVRHKAED KRAAAEVTRN QQASKTAQQA EYIRRTGRIP SSFSCWSWCS
101: SGFEFQKAER TPPHRLTAAA AFVPPFSKPA PSKWDDAQKW IASPTSNRGG SKAGGGQARR GGLAGYVSRQ AAAKVVLNVV EEADTKRVDG SQAKKEISGI
201: KSVNWVGEPH PRLDLGVKPT VVVENPVVDS AVNLSWHDSS TSIQSATAFM TPAPTVRSVS MRDMGTEMTP IASQEPSRTG TPAGATSPLY SPTSSRPATP
301: QRRAPVSTQT DSADCHDDLN DKEMSEKELQ RKTRREIMVL GQKLGKTNIA AWASKEEDTD ASISTMTVSK DQPDKSVIEV RAAAWEEAEK TKYLARFKRE
401: EIKIQAWENH QKATIEAEMR KIEVEVERMR ACAHEKLMNQ LAAVRHKAED KRAAAEVTRN QQASKTAQQA EYIRRTGRIP SSFSCWSWCS
001: MDYERIGKTQ VTSSGGGFSP GKLRSMLLLG VDRKKNEEEE STPTMRSGSN QIDDPRVYVA SGLDDCKDVD VVSEITDCST SGIARSISLG LQEYSDYDNV
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS
Arabidopsis Description
At2g02170/F5O4.6 [Source:UniProtKB/TrEMBL;Acc:Q9ZUM1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.