Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G053500.1 | Wheat | nucleus | 83.53 | 83.69 |
| TraesCS6A01G046400.1 | Wheat | nucleus | 82.94 | 83.27 |
| TraesCS6B01G062500.1 | Wheat | nucleus | 82.55 | 82.87 |
| HORVU0Hr1G040310.2 | Barley | cytosol, mitochondrion, nucleus | 82.94 | 82.3 |
| EES06158 | Sorghum | nucleus, plastid | 84.71 | 75.79 |
| Zm00001d054034_P001 | Maize | nucleus | 79.22 | 73.32 |
| GSMUA_Achr5P11780_001 | Banana | cytosol | 38.82 | 61.3 |
| GSMUA_Achr1P02030_001 | Banana | nucleus | 56.67 | 58.98 |
| GSMUA_Achr11P... | Banana | nucleus | 56.47 | 58.66 |
| VIT_01s0010g01760.t01 | Wine grape | nucleus | 58.63 | 58.63 |
| CDY09386 | Canola | nucleus | 44.9 | 57.11 |
| Bra026612.1-P | Field mustard | nucleus | 45.29 | 55.66 |
| GSMUA_Achr2P10980_001 | Banana | nucleus | 45.29 | 54.87 |
| CDY15819 | Canola | nucleus | 47.25 | 54.52 |
| KRH42459 | Soybean | nucleus | 53.33 | 53.33 |
| KRH58560 | Soybean | nucleus | 52.94 | 53.25 |
| CDY17607 | Canola | nucleus | 46.27 | 53.15 |
| CDY03066 | Canola | nucleus | 41.18 | 52.11 |
| Bra024828.1-P | Field mustard | nucleus | 45.88 | 52.0 |
| Os03t0120200-01 | Rice | nucleus | 42.35 | 51.06 |
| Solyc01g008180.2.1 | Tomato | nucleus | 52.16 | 50.96 |
| AT2G02170.2 | Thale cress | nucleus | 48.04 | 50.41 |
| GSMUA_Achr5P19220_001 | Banana | nucleus | 39.02 | 47.04 |
| Os12t0613600-01 | Rice | nucleus | 30.98 | 37.0 |
| Os04t0620200-01 | Rice | nucleus, plastid | 32.94 | 31.58 |
| Os02t0602000-01 | Rice | mitochondrion | 18.24 | 27.35 |
| Os07t0208600-01 | Rice | nucleus | 13.92 | 27.1 |
| Os07t0569100-01 | Rice | plasma membrane | 15.69 | 25.32 |
| Os03t0808300-01 | Rice | plasma membrane | 13.73 | 24.65 |
| Os11t0616300-01 | Rice | nucleus | 19.41 | 20.08 |
Protein Annotations
| EMBL:AK102604 | EnsemblPlants:Os02t0116800-01 | EnsemblPlantsGene:Os02g0116800 | EntrezGene:4328082 | InterPro:Remorin_C | ncoils:Coil |
| PANTHER:PTHR31471 | PANTHER:PTHR31471:SF1 | PFAM:PF03763 | ProteinID:BAD07722.1 | ProteinID:BAF07596.1 | ProteinID:BAS76662.1 |
| ProteinID:EAZ21500.1 | RefSeq:XP_015627389.1 | SEG:seg | UniParc:UPI00002367B8 | UniProt:Q6ZGM2 | MapMan:35.2 |
Description
REMORIN 6.1Remorin, C-terminal region domain containing protein. (Os02t0116800-01)
Coordinates
chr2:+:890263..894233
Molecular Weight (calculated)
56134.7 Da
IEP (calculated)
6.726
GRAVY (calculated)
-0.812
Length
510 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYERIEKPF PTQGGGFSPK RLRAMLLGVE KRRKGQEEEE EGDAGEVDDE YGAVPKSSVR SDADSDARRG GSMCEEYKDV DVVSTISESS SSLETGSGHR
101: SRDTHSMGSR VRVPEEDSCD SESVASNFEF HKERGASARS VTAAIVPPFS KPAPSKWDDA QKWIASPTTN RPGRAGGVPQ RKMEKTSFGG GRLPATKVVL
201: EATEEIDTKR VDPSQEKREI GWQKAVNWAP PDPYPEVETC AKSALAEEIT VADSAVTFSR HDSSATLQSA TTCIPPPPTV RSVSMRDMGT EMTPIASQEP
301: SRTGTPVRAT SPDCSRPTTP RKTIGPNAIG AVIGHGECSN VELSEQELQM KTRREIMLLG TQLGKTNIAA WASNKEEEKD ASLSLKGVPM DQSTQKVTEI
401: RAAAWEEAEK AKYLARFKRE EIKIQAWEDH QRAKIEAEMR KIEVDVERMR ARAQDKLMSQ LASARHTADE KRAAAELKRS RAAAKTAEQA DHIRRTGRMP
501: SSIGCWNWCS
101: SRDTHSMGSR VRVPEEDSCD SESVASNFEF HKERGASARS VTAAIVPPFS KPAPSKWDDA QKWIASPTTN RPGRAGGVPQ RKMEKTSFGG GRLPATKVVL
201: EATEEIDTKR VDPSQEKREI GWQKAVNWAP PDPYPEVETC AKSALAEEIT VADSAVTFSR HDSSATLQSA TTCIPPPPTV RSVSMRDMGT EMTPIASQEP
301: SRTGTPVRAT SPDCSRPTTP RKTIGPNAIG AVIGHGECSN VELSEQELQM KTRREIMLLG TQLGKTNIAA WASNKEEEKD ASLSLKGVPM DQSTQKVTEI
401: RAAAWEEAEK AKYLARFKRE EIKIQAWEDH QRAKIEAEMR KIEVDVERMR ARAQDKLMSQ LASARHTADE KRAAAELKRS RAAAKTAEQA DHIRRTGRMP
501: SSIGCWNWCS
001: MDYERIGKTQ VTSSGGGFSP GKLRSMLLLG VDRKKNEEEE STPTMRSGSN QIDDPRVYVA SGLDDCKDVD VVSEITDCST SGIARSISLG LQEYSDYDNV
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS
Arabidopsis Description
At2g02170/F5O4.6 [Source:UniProtKB/TrEMBL;Acc:Q9ZUM1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.