Factsheet for Os02t0602000-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 4
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051005_P001	Maize	mitochondrion, nucleus	50.0	54.66
EES05380	Sorghum	mitochondrion	50.88	51.95
GSMUA_Achr9P07790_001	Banana	nucleus	30.88	33.44
GSMUA_Achr3P17060_001	Banana	nucleus	31.76	31.3
Solyc05g014710.2.1	Tomato	nucleus	31.47	30.57
PGSC0003DMT400044982	Potato	nucleus	31.18	30.46
AT1G67590.1	Thale cress	nucleus	30.88	30.26
CDY12657	Canola	cytosol	30.59	29.46
CDY01823	Canola	nucleus	30.59	29.38
Bra033989.1-P	Field mustard	cytosol	30.59	29.3
CDY32543	Canola	nucleus	30.29	29.18
CDX96080	Canola	nucleus	30.29	29.01
VIT_01s0010g02560.t01	Wine grape	nucleus	30.0	28.41
KRH42640	Soybean	nucleus	29.41	27.25
KRH58742	Soybean	nucleus	29.41	27.25
Bra004237.1-P	Field mustard	nucleus	24.12	25.79
Os03t0120200-01	Rice	nucleus	23.82	19.15
Os02t0116800-01	Rice	nucleus	27.35	18.24
Os03t0808300-01	Rice	plasma membrane	14.71	17.61
Os12t0613600-01	Rice	nucleus	21.47	17.1
Os07t0208600-01	Rice	nucleus	12.65	16.41
Os07t0569100-01	Rice	plasma membrane	14.41	15.51
Os04t0620200-01	Rice	nucleus, plastid	23.24	14.85
Os11t0616300-01	Rice	nucleus	20.88	14.4

Protein Annotations

MapMan:35.2	EntrezGene:4329898	EMBL:AK103400	ProteinID:BAD19340.1	ProteinID:BAD22166.1	ProteinID:BAF09268.1
ProteinID:BAS79622.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:Os02g0602000	EnsemblPlants:Os02t0602000-01	PFAM:PF03763	PANTHER:PTHR31471
PANTHER:PTHR31471:SF16	UniProt:Q6K5F9	InterPro:Remorin_C	UniParc:UPI0000375823	RefSeq:XP_015624799.1	SEG:seg

Description

REMORIN 6.5Remorin, C-terminal region domain containing protein. (Os02t0602000-01)

Coordinates

chr2:+:23559972..23561665

Molecular Weight (calculated)

36014.4 Da

IEP (calculated)

11.003

GRAVY (calculated)

-0.656

Length

340 amino acids

Sequence
(BLAST)

001: MRRSSQGKSS SGGGVGGVRR YDVHGGGNLL ACYAKAARPR PSKWDDAQKW LSRAGDDDCG GEATRRRSSC ASADDGLLLP PPPAARKGAG GWRSWSNVEW
101: EGAPAAMAPA LKAARGDEGV DTKVVDAVQA YVPQRCVVSL RDVGTEMTPG GSKEPSRANT PRVVAPAATA RVVARGTASP GQCDGGSRDS AVAGGVVDLR
201: AARKRADQGH DEVAGTITAV SPATAWGDAE RAKYMARYRR EEMRIQAWEN RERRKAELQM RTAEEKAERM RLRAQARTAG KLATAQAEAK ARRARAEAEL
301: ALGRPGGGAK GWLLTRSASW SSGSGRSPSS LSLRLPLLCR

Best Arabidopsis Sequence Match ( AT1G67590.1 )
(BLAST)

001: MRSSVEDNKG WIGPATPEIS NGFEFQKGSN RTPNHHRSTM GKPAPSKWDD AQKWLSGVGF ARGGGGGGDK SSHHSRSNKP RNSNADDLRL IASASQRERE
101: GEDQYVEYDD EEMAAGRPEV ETKNVDCGES VWRKESSINP TAVIRSVCVR DMGTEMTPIG SQEPSRTATP VRATTPVGRS PVTSPVRASQ RGEAVGVVME
201: TVTEVRRVES NNSEKVNGFV ESKKAMSAME ARAMAWDEAE RAKFMARYKR EEVKIQAWEN HEKRKAEMEM KKMEVKAERM KARAEEKLAN KLAATKRIAE
301: ERRANAEAKL NEKAVKTSEK ADYIRRSGHL PSSFSFSFKL PSRCWCQ

Arabidopsis Description

F12A21.28 [Source:UniProtKB/TrEMBL;Acc:Q9SR48]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.