Factsheet for Bra004237.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96080	Canola	nucleus	97.8	87.61
CDY01823	Canola	nucleus	97.48	87.57
Bra033989.1-P	Field mustard	cytosol	87.74	78.59
AT1G67590.1	Thale cress	nucleus	83.33	76.37
VIT_01s0010g02560.t01	Wine grape	nucleus	54.72	48.47
PGSC0003DMT400044982	Potato	nucleus	52.52	47.99
Solyc05g014710.2.1	Tomato	nucleus	52.52	47.71
GSMUA_Achr9P07790_001	Banana	nucleus	45.91	46.5
KRH58742	Soybean	nucleus	51.26	44.41
TraesCS4A01G238400.1	Wheat	nucleus	48.43	44.13
KRH42640	Soybean	nucleus	50.63	43.87
GSMUA_Achr3P17060_001	Banana	nucleus	47.48	43.77
TraesCS4D01G075000.1	Wheat	nucleus	47.8	43.06
HORVU4Hr1G012760.3	Barley	nucleus	47.48	43.02
TraesCS4B01G076500.1	Wheat	nucleus	47.48	42.66
Zm00001d050790_P003	Maize	nucleus	43.71	41.0
OQU85140	Sorghum	cytosol	44.97	39.83
Zm00001d051005_P001	Maize	mitochondrion, nucleus	31.45	32.15
EES05380	Sorghum	mitochondrion	31.45	30.03
Bra026612.1-P	Field mustard	nucleus	34.28	26.27
Os02t0602000-01	Rice	mitochondrion	25.79	24.12
Bra024828.1-P	Field mustard	nucleus	33.65	23.78
Bra032380.1-P	Field mustard	nucleus	30.82	20.21
Bra004657.1-P	Field mustard	cytosol	14.78	17.41
Bra010777.1-P	Field mustard	nucleus	29.25	17.25
Bra007335.1-P	Field mustard	nucleus	13.84	15.02
Bra040560.1-P	Field mustard	nucleus	19.5	14.8
Bra039695.1-P	Field mustard	cytosol	22.01	10.32
Bra040561.1-P	Field mustard	cytosol	1.89	2.53

Protein Annotations

EnsemblPlants:Bra004237.1	EnsemblPlants:Bra004237.1-P	EnsemblPlantsGene:Bra004237	InterPro:Remorin_C	ncoils:Coil	PANTHER:PTHR31471
PANTHER:PTHR31471:SF15	PFAM:PF03763	SEG:seg	UniParc:UPI000254165C	UniProt:M4CJ53	MapMan:35.2

Description

AT1G67590 (E=2e-096) | remorin family protein

Coordinates

chrA07:-:17586546..17587847

Molecular Weight (calculated)

34983.5 Da

IEP (calculated)

8.911

GRAVY (calculated)

-0.965

Length

318 amino acids

Sequence
(BLAST)

001: MRSQGVEDNK GWLGPATPEI SNGNGNTGFE FQKGANRTPN HQHRSTIGKP APSKWDDAQK WLSGVGLARG GGGEKNHHSS RNCKPRNSNA DDLRLIASAS
101: QREREGEDQY VEYDEEEGAA GRPEVETKNV DCGEPGGSVW RKESIINPTA VIRSVCVRDM GTEMTPIGSQ EPSRTGTPVR ATTPVGRSPV TSPVRASRGV
201: EAVRTETVVT EGRSVESNNN ERIRYGENNN DNKAMNAMEA RAMAWDEAER AKFMARAEEK LANKLAATKR IAEERRANAE AKLNEKAVRT SERADYIRRS
301: GHLPSSFSFK IPSFSLCW

Best Arabidopsis Sequence Match ( AT1G67590.1 )
(BLAST)

001: MRSSVEDNKG WIGPATPEIS NGFEFQKGSN RTPNHHRSTM GKPAPSKWDD AQKWLSGVGF ARGGGGGGDK SSHHSRSNKP RNSNADDLRL IASASQRERE
101: GEDQYVEYDD EEMAAGRPEV ETKNVDCGES VWRKESSINP TAVIRSVCVR DMGTEMTPIG SQEPSRTATP VRATTPVGRS PVTSPVRASQ RGEAVGVVME
201: TVTEVRRVES NNSEKVNGFV ESKKAMSAME ARAMAWDEAE RAKFMARYKR EEVKIQAWEN HEKRKAEMEM KKMEVKAERM KARAEEKLAN KLAATKRIAE
301: ERRANAEAKL NEKAVKTSEK ADYIRRSGHL PSSFSFSFKL PSRCWCQ

Arabidopsis Description

F12A21.28 [Source:UniProtKB/TrEMBL;Acc:Q9SR48]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.