Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48774 | Canola | nucleus | 98.89 | 98.89 |
| CDX79905 | Canola | nucleus | 97.41 | 97.77 |
| AT2G41870.1 | Thale cress | nucleus | 78.89 | 77.74 |
| Solyc10g080240.1.1 | Tomato | cytosol | 13.33 | 72.0 |
| Bra007335.1-P | Field mustard | nucleus | 68.52 | 63.14 |
| VIT_08s0007g08280.t01 | Wine grape | nucleus | 51.48 | 51.29 |
| KRG95278 | Soybean | nucleus | 50.0 | 49.82 |
| Zm00001d034558_P001 | Maize | nucleus | 45.19 | 46.92 |
| GSMUA_Achr4P33120_001 | Banana | nucleus | 45.93 | 45.59 |
| GSMUA_Achr6P00160_001 | Banana | nucleus | 45.56 | 45.39 |
| HORVU2Hr1G039030.1 | Barley | cytosol, nucleus | 42.59 | 45.28 |
| Solyc04g015520.2.1 | Tomato | nucleus | 50.74 | 45.21 |
| PGSC0003DMT400060978 | Potato | nucleus | 48.89 | 45.05 |
| Solyc10g080230.1.1 | Tomato | cytosol | 26.3 | 44.94 |
| KRH33097 | Soybean | nucleus | 48.89 | 44.59 |
| KRH71974 | Soybean | nucleus | 49.26 | 44.48 |
| Zm00001d006626_P001 | Maize | nucleus | 42.96 | 44.44 |
| Os07t0208600-01 | Rice | nucleus | 41.85 | 43.13 |
| PGSC0003DMT400070037 | Potato | nucleus | 50.37 | 42.9 |
| Os03t0808300-01 | Rice | plasma membrane | 44.44 | 42.25 |
| GSMUA_Achr2P13770_001 | Banana | cytosol, nucleus, plastid | 43.7 | 42.14 |
| TraesCS7D01G432700.1 | Wheat | nucleus | 42.59 | 41.52 |
| OQU90788 | Sorghum | nucleus | 44.07 | 40.75 |
| HORVU7Hr1G100790.1 | Barley | nucleus | 41.85 | 40.65 |
| TraesCS7B01G342300.1 | Wheat | nucleus | 41.85 | 40.65 |
| TraesCS7A01G443500.1 | Wheat | nucleus | 42.22 | 40.14 |
| Zm00001d021839_P001 | Maize | nucleus | 43.33 | 39.8 |
| EER99573 | Sorghum | nucleus | 45.93 | 39.62 |
| TraesCS2B01G226600.1 | Wheat | cytosol, nucleus, plastid | 45.19 | 39.61 |
| TraesCS5D01G477500.1 | Wheat | nucleus | 44.44 | 39.34 |
| TraesCS5B01G476700.1 | Wheat | nucleus | 44.44 | 39.22 |
| TraesCS2D01G206900.1 | Wheat | cytosol, plastid | 44.81 | 39.16 |
| KRH66963 | Soybean | nucleus | 32.59 | 39.11 |
| TraesCS5A01G464900.1 | Wheat | nucleus | 44.44 | 38.96 |
| Os07t0569100-01 | Rice | plasma membrane | 45.56 | 38.92 |
| TraesCS2A01G199300.1 | Wheat | nucleus | 44.81 | 38.91 |
| HORVU5Hr1G111130.2 | Barley | cytosol, nucleus | 45.93 | 36.69 |
| HORVU5Hr1G111120.3 | Barley | cytosol | 41.11 | 35.81 |
| Bra033989.1-P | Field mustard | cytosol | 23.33 | 17.75 |
| Bra026612.1-P | Field mustard | nucleus | 23.7 | 15.42 |
| Bra004237.1-P | Field mustard | nucleus | 17.41 | 14.78 |
| Bra024828.1-P | Field mustard | nucleus | 24.44 | 14.67 |
| Bra040560.1-P | Field mustard | nucleus | 18.52 | 11.93 |
| Bra032380.1-P | Field mustard | nucleus | 19.63 | 10.93 |
| Bra010777.1-P | Field mustard | nucleus | 20.74 | 10.39 |
| Bra039695.1-P | Field mustard | cytosol | 18.15 | 7.23 |
| Bra040561.1-P | Field mustard | cytosol | 0.74 | 0.84 |
Protein Annotations
Description
AT2G41870 (E=9e-084) | remorin family protein
Coordinates
chrA05:-:1265296..1266624
Molecular Weight (calculated)
29894.2 Da
IEP (calculated)
9.715
GRAVY (calculated)
-0.784
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLTLYGQES SPDRTSRDVT PEAVVRDIHA LAPASTTVLP PPPALRGYFS PTRSTTTSIS EGASSGENFT TISREFNALV IAGSSMGNNN EPTARDVTQG
101: EELMRSIHEE REEEEMNPLA IVPEQYPDSS LDQGSGNESG QVQGRGGMTS VQRVKREEVE AKITAWQTAK LAKINNRFKR EDAVINGRVN EQVHKANSWM
201: KKIERKLEER KAKAMEKTQN QVARAQRKAE ERRATAEAKR GTEVAKVVEV ANLMRAVGRS PSKRSCFSFS
101: EELMRSIHEE REEEEMNPLA IVPEQYPDSS LDQGSGNESG QVQGRGGMTS VQRVKREEVE AKITAWQTAK LAKINNRFKR EDAVINGRVN EQVHKANSWM
201: KKIERKLEER KAKAMEKTQN QVARAQRKAE ERRATAEAKR GTEVAKVVEV ANLMRAVGRS PSKRSCFSFS
001: MLTLYHQERS PDATSNDRDE TPETVVREVH ALTPAPEDNS RTMTATLPPP PAFRGYFSPP RSATTMSEGE NFTTISREFN ALVIAGSSME NNELMTRDVT
101: QREDERQDEL MRIHEDTDHE EETNPLAIVP DQYPGSGLDP GSDNGPGQSR VGSTVQRVKR EEVEAKITAW QTAKLAKINN RFKREDAVIN GWFNEQVNKA
201: NSWMKKIERK LEERKAKAME KTQNNVAKAQ RKAEERRATA EAKRGTEVAK VVEVANLMRA LGRPPAKRSF FSFS
101: QREDERQDEL MRIHEDTDHE EETNPLAIVP DQYPGSGLDP GSDNGPGQSR VGSTVQRVKR EEVEAKITAW QTAKLAKINN RFKREDAVIN GWFNEQVNKA
201: NSWMKKIERK LEERKAKAME KTQNNVAKAQ RKAEERRATA EAKRGTEVAK VVEVANLMRA LGRPPAKRSF FSFS
Arabidopsis Description
Putative DNA binding protein [Source:UniProtKB/TrEMBL;Acc:P93758]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.