Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 3
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2A01G199300.1 | Wheat | nucleus | 96.44 | 95.82 |
TraesCS2B01G226600.1 | Wheat | cytosol, nucleus, plastid | 95.15 | 95.45 |
HORVU2Hr1G039030.1 | Barley | cytosol, nucleus | 77.99 | 94.88 |
Zm00001d006626_P001 | Maize | nucleus | 65.7 | 77.78 |
Zm00001d021839_P001 | Maize | nucleus | 72.17 | 75.85 |
Os07t0569100-01 | Rice | plasma membrane | 76.38 | 74.68 |
EER99573 | Sorghum | nucleus | 75.08 | 74.12 |
Solyc10g080240.1.1 | Tomato | cytosol | 11.97 | 74.0 |
GSMUA_Achr6P00160_001 | Banana | nucleus | 49.84 | 56.83 |
GSMUA_Achr4P33120_001 | Banana | nucleus | 48.87 | 55.51 |
GSMUA_Achr2P13770_001 | Banana | cytosol, nucleus, plastid | 49.51 | 54.64 |
VIT_08s0007g08280.t01 | Wine grape | nucleus | 46.28 | 52.77 |
TraesCS5D01G477500.1 | Wheat | nucleus | 51.46 | 52.13 |
KRG95278 | Soybean | nucleus | 45.31 | 51.66 |
KRH71974 | Soybean | nucleus | 47.9 | 49.5 |
KRH33097 | Soybean | nucleus | 46.28 | 48.31 |
TraesCS7D01G432700.1 | Wheat | nucleus | 43.04 | 48.01 |
PGSC0003DMT400060978 | Potato | nucleus | 44.66 | 47.1 |
Solyc04g015520.2.1 | Tomato | nucleus | 44.98 | 45.87 |
CDX79905 | Canola | nucleus | 39.81 | 45.72 |
Solyc10g080230.1.1 | Tomato | cytosol | 23.3 | 45.57 |
Bra004657.1-P | Field mustard | cytosol | 39.16 | 44.81 |
AT2G41870.1 | Thale cress | nucleus | 39.48 | 44.53 |
PGSC0003DMT400070037 | Potato | nucleus | 45.63 | 44.48 |
CDY48774 | Canola | nucleus | 38.84 | 44.44 |
CDX72021 | Canola | nucleus | 38.84 | 44.12 |
CDY06095 | Canola | nucleus | 40.45 | 42.66 |
Bra007335.1-P | Field mustard | nucleus | 40.45 | 42.66 |
AT3G57540.1 | Thale cress | nucleus | 40.45 | 42.23 |
KRH66963 | Soybean | nucleus | 28.48 | 39.11 |
TraesCS4D01G075000.1 | Wheat | nucleus | 22.01 | 19.26 |
TraesCS4D01G343800.1 | Wheat | nucleus | 23.3 | 17.06 |
TraesCS6D01G053500.1 | Wheat | nucleus | 24.27 | 14.73 |
TraesCS2D01G464900.1 | Wheat | nucleus, plastid | 21.68 | 12.67 |
TraesCS2D01G343900.1 | Wheat | plastid | 16.5 | 12.29 |
TraesCS5D01G047600.3 | Wheat | cytosol | 17.15 | 11.83 |
Protein Annotations
EnsemblPlants:TraesCS2D01G206900.1 | EnsemblPlantsGene:TraesCS2D01G206900 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0007154 |
GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009738 | GO:GO:0009987 | GO:GO:0016020 |
GO:GO:1900458 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF39 | PFAM:PF03763 |
SEG:seg | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:160598161..160599194
Molecular Weight (calculated)
33304.9 Da
IEP (calculated)
9.771
GRAVY (calculated)
-0.674
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSGQTAVSG SSSSIIVISR GVEQGSGSGE QQHQRRPVEV EEGEEPEFRD IHALSPPRAL SLYRRSRPGS RDSWGSAAGA GGSRHTSIRS VGSDTAPSEL
101: FPTMSREFSA MVAAAASANA SSSAAAGHRE SVDRVANEDA LGRIGEEELE ETNPLAIVPD SNPIPSPRRG LSPRPVEVAA PGAGHGQGDE VSVGQVKKDE
201: VETKIAAWQI AEVAKVNNRF KREEVVINGW EGDQVEKASA WLNKYERKLE EKRAKAMEKA QNEVARARRK AEDKRASAEA KRGTKVARVL ELANFMRAVG
301: RAPTKRSFF
101: FPTMSREFSA MVAAAASANA SSSAAAGHRE SVDRVANEDA LGRIGEEELE ETNPLAIVPD SNPIPSPRRG LSPRPVEVAA PGAGHGQGDE VSVGQVKKDE
201: VETKIAAWQI AEVAKVNNRF KREEVVINGW EGDQVEKASA WLNKYERKLE EKRAKAMEKA QNEVARARRK AEDKRASAEA KRGTKVARVL ELANFMRAVG
301: RAPTKRSFF
001: MLTLYGQERS PENSTTSTTD ASDRRDETPS SEIVVRDIHA MTTTTELTRP QQRGSGGGYL SPSRSIAFSD GTTSSGENFT TVSREFNALV IAGSSMDNNS
101: NGTNQSGGHR DVIRDERNEL TRIGENDDVG DHGQVPEEDS NPWAIVPDDY NNRDGSENNI VLASSGGQNR MVTTASVQRV KREEVEAKIT AWQTAKVAKI
201: NNRFKRQDAV INGWLNEQVH RANSWMKKIE RKLEDRRAKA MEKTQNKVAK AQRKAEERRA TAEGKRGTEV ARVLEVANLM RAVGRPPAKR SFFSLS
101: NGTNQSGGHR DVIRDERNEL TRIGENDDVG DHGQVPEEDS NPWAIVPDDY NNRDGSENNI VLASSGGQNR MVTTASVQRV KREEVEAKIT AWQTAKVAKI
201: NNRFKRQDAV INGWLNEQVH RANSWMKKIE RKLEDRRAKA MEKTQNKVAK AQRKAEERRA TAEGKRGTEV ARVLEVANLM RAVGRPPAKR SFFSLS
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q93YN8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.