Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004657.1-P | Field mustard | cytosol | 98.89 | 98.89 |
| CDX79905 | Canola | nucleus | 97.78 | 98.14 |
| AT2G41870.1 | Thale cress | nucleus | 78.52 | 77.37 |
| Solyc10g080240.1.1 | Tomato | cytosol | 13.33 | 72.0 |
| CDX72021 | Canola | nucleus | 66.67 | 66.18 |
| CDY06095 | Canola | nucleus | 68.15 | 62.8 |
| VIT_08s0007g08280.t01 | Wine grape | nucleus | 51.85 | 51.66 |
| KRG95278 | Soybean | nucleus | 49.26 | 49.08 |
| Zm00001d034558_P001 | Maize | nucleus | 45.19 | 46.92 |
| PGSC0003DMT400060978 | Potato | nucleus | 49.26 | 45.39 |
| Solyc04g015520.2.1 | Tomato | nucleus | 50.74 | 45.21 |
| GSMUA_Achr6P00160_001 | Banana | nucleus | 45.19 | 45.02 |
| KRH33097 | Soybean | nucleus | 49.26 | 44.93 |
| HORVU2Hr1G039030.1 | Barley | cytosol, nucleus | 42.22 | 44.88 |
| GSMUA_Achr4P33120_001 | Banana | nucleus | 45.19 | 44.85 |
| KRH71974 | Soybean | nucleus | 49.63 | 44.82 |
| Solyc10g080230.1.1 | Tomato | cytosol | 25.93 | 44.3 |
| Zm00001d006626_P001 | Maize | nucleus | 42.59 | 44.06 |
| PGSC0003DMT400070037 | Potato | nucleus | 50.37 | 42.9 |
| Os07t0208600-01 | Rice | nucleus | 41.11 | 42.37 |
| Os03t0808300-01 | Rice | plasma membrane | 44.44 | 42.25 |
| GSMUA_Achr2P13770_001 | Banana | cytosol, nucleus, plastid | 43.33 | 41.79 |
| TraesCS7D01G432700.1 | Wheat | nucleus | 42.59 | 41.52 |
| TraesCS7B01G342300.1 | Wheat | nucleus | 41.85 | 40.65 |
| HORVU7Hr1G100790.1 | Barley | nucleus | 41.85 | 40.65 |
| OQU90788 | Sorghum | nucleus | 43.7 | 40.41 |
| TraesCS7A01G443500.1 | Wheat | nucleus | 42.22 | 40.14 |
| Zm00001d021839_P001 | Maize | nucleus | 42.96 | 39.46 |
| EER99573 | Sorghum | nucleus | 45.56 | 39.3 |
| TraesCS2B01G226600.1 | Wheat | cytosol, nucleus, plastid | 44.81 | 39.29 |
| TraesCS5D01G477500.1 | Wheat | nucleus | 44.07 | 39.02 |
| TraesCS5B01G476700.1 | Wheat | nucleus | 44.07 | 38.89 |
| TraesCS2D01G206900.1 | Wheat | cytosol, plastid | 44.44 | 38.84 |
| KRH66963 | Soybean | nucleus | 32.22 | 38.67 |
| TraesCS5A01G464900.1 | Wheat | nucleus | 44.07 | 38.64 |
| Os07t0569100-01 | Rice | plasma membrane | 45.19 | 38.61 |
| TraesCS2A01G199300.1 | Wheat | nucleus | 44.44 | 38.59 |
| HORVU5Hr1G111130.2 | Barley | cytosol, nucleus | 45.56 | 36.39 |
| HORVU5Hr1G111120.3 | Barley | cytosol | 40.74 | 35.48 |
| CDY32543 | Canola | nucleus | 22.96 | 17.56 |
| CDY12657 | Canola | cytosol | 22.96 | 17.56 |
| CDY01823 | Canola | nucleus | 22.96 | 17.51 |
| CDX96080 | Canola | nucleus | 22.59 | 17.18 |
| CDY09386 | Canola | nucleus | 23.33 | 15.71 |
| CDY03066 | Canola | nucleus | 22.22 | 14.89 |
| CDY17607 | Canola | nucleus | 24.44 | 14.86 |
| CDY15819 | Canola | nucleus | 23.33 | 14.25 |
| CDY68168 | Canola | nucleus | 18.89 | 12.17 |
| CDY08209 | Canola | nucleus | 18.15 | 11.69 |
| CDY12047 | Canola | nucleus | 20.37 | 11.0 |
| CDY09599 | Canola | nucleus | 19.26 | 10.92 |
| CDX90244 | Canola | nucleus | 20.0 | 10.8 |
| CDY26269 | Canola | nucleus | 19.26 | 10.72 |
| CDY36609 | Canola | cytosol | 17.78 | 7.47 |
| CDY24070 | Canola | extracellular | 18.52 | 6.83 |
| CDY62474 | Canola | nucleus | 14.07 | 4.35 |
| CDY62472 | Canola | nucleus | 14.07 | 4.35 |
Protein Annotations
| EnsemblPlants:CDY48774 | EnsemblPlantsGene:GSBRNA2T00091685001 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF7 |
| PFAM:PF03763 | ProteinID:CDY48774 | ProteinID:CDY48774.1 | SEG:seg | UniParc:UPI0004EBDE1C | UniProt:A0A078IH95 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC04g02270DBnaC04g02270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IH95]
Coordinates
chrLK032790:-:125084..126665
Molecular Weight (calculated)
29906.1 Da
IEP (calculated)
9.037
GRAVY (calculated)
-0.804
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLTLYGQES SPDRTSRDET PEAVVRDIHA LAPASTTVLP PPPALRGYFS PTRSTTTSIS EGASSGENFT TISREFNALV IAGSSMGNNN EPTARDVTQG
101: EELMRSIHEE REEEEMNPLA IVPEQYPDSS LDQGSGNESG QVQGRGGMTS VQRVKREEVE AKITAWQTAK LAKINNRFKR EDAVINGRVN EQVHQANSWM
201: KKIERKLEER KAKALEKTQN QVARAQRKAE ERRATAEAKR GTEVAKVVEV ANLMRAVGRS PSKRSCFSFS
101: EELMRSIHEE REEEEMNPLA IVPEQYPDSS LDQGSGNESG QVQGRGGMTS VQRVKREEVE AKITAWQTAK LAKINNRFKR EDAVINGRVN EQVHQANSWM
201: KKIERKLEER KAKALEKTQN QVARAQRKAE ERRATAEAKR GTEVAKVVEV ANLMRAVGRS PSKRSCFSFS
001: MLTLYHQERS PDATSNDRDE TPETVVREVH ALTPAPEDNS RTMTATLPPP PAFRGYFSPP RSATTMSEGE NFTTISREFN ALVIAGSSME NNELMTRDVT
101: QREDERQDEL MRIHEDTDHE EETNPLAIVP DQYPGSGLDP GSDNGPGQSR VGSTVQRVKR EEVEAKITAW QTAKLAKINN RFKREDAVIN GWFNEQVNKA
201: NSWMKKIERK LEERKAKAME KTQNNVAKAQ RKAEERRATA EAKRGTEVAK VVEVANLMRA LGRPPAKRSF FSFS
101: QREDERQDEL MRIHEDTDHE EETNPLAIVP DQYPGSGLDP GSDNGPGQSR VGSTVQRVKR EEVEAKITAW QTAKLAKINN RFKREDAVIN GWFNEQVNKA
201: NSWMKKIERK LEERKAKAME KTQNNVAKAQ RKAEERRATA EAKRGTEVAK VVEVANLMRA LGRPPAKRSF FSFS
Arabidopsis Description
Putative DNA binding protein [Source:UniProtKB/TrEMBL;Acc:P93758]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.