Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026612.1-P | Field mustard | nucleus | 91.77 | 88.67 |
| CDY15819 | Canola | nucleus | 96.76 | 87.78 |
| CDY03066 | Canola | nucleus | 77.31 | 76.92 |
| CDY17607 | Canola | nucleus | 83.04 | 75.0 |
| AT2G02170.2 | Thale cress | nucleus | 87.28 | 72.02 |
| VIT_01s0010g01760.t01 | Wine grape | nucleus | 69.83 | 54.9 |
| GSMUA_Achr5P11780_001 | Banana | cytosol | 43.14 | 53.56 |
| KRH58560 | Soybean | nucleus | 66.08 | 52.27 |
| KRH42459 | Soybean | nucleus | 66.33 | 52.16 |
| GSMUA_Achr1P02030_001 | Banana | nucleus | 59.85 | 48.98 |
| GSMUA_Achr11P... | Banana | nucleus | 59.1 | 48.27 |
| Solyc01g008180.2.1 | Tomato | nucleus | 61.35 | 47.13 |
| GSMUA_Achr2P10980_001 | Banana | nucleus | 47.63 | 45.37 |
| Os02t0116800-01 | Rice | nucleus | 57.11 | 44.9 |
| TraesCS6D01G053500.1 | Wheat | nucleus | 56.11 | 44.2 |
| TraesCS6A01G046400.1 | Wheat | nucleus | 55.86 | 44.09 |
| TraesCS6B01G062500.1 | Wheat | nucleus | 55.61 | 43.9 |
| HORVU0Hr1G040310.2 | Barley | cytosol, mitochondrion, nucleus | 55.61 | 43.39 |
| Os03t0120200-01 | Rice | nucleus | 44.39 | 42.08 |
| Zm00001d054034_P001 | Maize | nucleus | 57.36 | 41.74 |
| GSMUA_Achr5P19220_001 | Banana | nucleus | 43.39 | 41.13 |
| EES06158 | Sorghum | nucleus, plastid | 57.11 | 40.18 |
| Zm00001d027403_P001 | Maize | nucleus | 42.14 | 39.86 |
| KXG40319 | Sorghum | nucleus | 41.9 | 39.62 |
| TraesCS5A01G517700.1 | Wheat | nucleus | 41.65 | 39.57 |
| TraesCS4D01G343800.1 | Wheat | nucleus | 41.65 | 39.57 |
| TraesCS4B01G349100.1 | Wheat | nucleus | 41.4 | 39.15 |
| Zm00001d048481_P001 | Maize | cytosol, mitochondrion, nucleus | 40.65 | 38.72 |
| CDY01823 | Canola | nucleus | 32.92 | 37.29 |
| CDY32543 | Canola | nucleus | 32.67 | 37.11 |
| CDX96080 | Canola | nucleus | 32.67 | 36.9 |
| CDY12657 | Canola | cytosol | 32.42 | 36.83 |
| HORVU4Hr1G085140.6 | Barley | nucleus, plastid | 40.15 | 33.33 |
| CDY09599 | Canola | nucleus | 38.9 | 32.77 |
| CDY26269 | Canola | nucleus | 38.65 | 31.96 |
| CDX90244 | Canola | nucleus | 38.15 | 30.6 |
| CDY12047 | Canola | nucleus | 38.15 | 30.6 |
| CDX79905 | Canola | nucleus | 15.96 | 23.79 |
| CDY48774 | Canola | nucleus | 15.71 | 23.33 |
| CDX72021 | Canola | nucleus | 14.46 | 21.32 |
| CDY08209 | Canola | nucleus | 21.45 | 20.53 |
| CDY68168 | Canola | nucleus | 21.45 | 20.53 |
| CDY06095 | Canola | nucleus | 14.71 | 20.14 |
| CDY36609 | Canola | cytosol | 22.94 | 14.31 |
| CDY62474 | Canola | nucleus | 28.18 | 12.93 |
| CDY62472 | Canola | nucleus | 28.18 | 12.93 |
| CDY24070 | Canola | extracellular | 23.19 | 12.7 |
Protein Annotations
| EnsemblPlants:CDY09386 | EnsemblPlantsGene:GSBRNA2T00030864001 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF1 |
| PFAM:PF03763 | ProteinID:CDY09386 | ProteinID:CDY09386.1 | SEG:seg | UniParc:UPI0004EEECB5 | UniProt:A0A078F7N1 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA02g26240DBnaA02g26240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F7N1]
Coordinates
chrLK031995:+:417902..419999
Molecular Weight (calculated)
44166.1 Da
IEP (calculated)
10.147
GRAVY (calculated)
-0.818
Length
401 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYERIGKTQ VTSGGGGFSP GKLRTMLLGV DRKNKQEPGS NQILDLAASG SDDCKDVDVV TEITDSSTAS LFEFQKAEKE KTTPRMSVRS FSKPAPSKWD
101: DAQKWIASPT ANRPKTGQVQ AHASKKGPSF GRQSSIKIVD EEPDTKRVDV SQVKKETGGH KFVSWEVDSY LKPVLMVENS ATEVNLSRHD SSMATAFAQP
201: PPSTARSVSM RDMGTEMTPI ASQEPSRNGT PIRATTPIRS PVTSAPSSPG RGAREIMVLG TQLGKLNIAA WASKEEDAST SQTSKSVSEA RASAWEEAEK
301: AKHMARFRRE EMKIQAWENH QKAKSEAEMR KMEVEVERIK GRAQDRLMNK LAEIERKAEE KRAAAEAKKN REAAKTEKQA EQIRRTGKVP SLLFSCSSFC
401: S
101: DAQKWIASPT ANRPKTGQVQ AHASKKGPSF GRQSSIKIVD EEPDTKRVDV SQVKKETGGH KFVSWEVDSY LKPVLMVENS ATEVNLSRHD SSMATAFAQP
201: PPSTARSVSM RDMGTEMTPI ASQEPSRNGT PIRATTPIRS PVTSAPSSPG RGAREIMVLG TQLGKLNIAA WASKEEDAST SQTSKSVSEA RASAWEEAEK
301: AKHMARFRRE EMKIQAWENH QKAKSEAEMR KMEVEVERIK GRAQDRLMNK LAEIERKAEE KRAAAEAKKN REAAKTEKQA EQIRRTGKVP SLLFSCSSFC
401: S
001: MDYERIGKTQ VTSSGGGFSP GKLRSMLLLG VDRKKNEEEE STPTMRSGSN QIDDPRVYVA SGLDDCKDVD VVSEITDCST SGIARSISLG LQEYSDYDNV
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS
Arabidopsis Description
At2g02170/F5O4.6 [Source:UniProtKB/TrEMBL;Acc:Q9ZUM1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.