Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH42459 | Soybean | nucleus | 72.35 | 72.35 |
| KRH58560 | Soybean | nucleus | 71.57 | 71.99 |
| CDY09386 | Canola | nucleus | 54.9 | 69.83 |
| Bra026612.1-P | Field mustard | nucleus | 56.47 | 69.4 |
| CDY15819 | Canola | nucleus | 58.43 | 67.42 |
| Solyc01g008180.2.1 | Tomato | nucleus | 67.45 | 65.9 |
| AT2G02170.2 | Thale cress | nucleus | 62.55 | 65.64 |
| Bra024828.1-P | Field mustard | nucleus | 57.65 | 65.33 |
| CDY17607 | Canola | nucleus | 56.86 | 65.32 |
| CDY03066 | Canola | nucleus | 51.37 | 65.01 |
| GSMUA_Achr5P11780_001 | Banana | cytosol | 40.0 | 63.16 |
| GSMUA_Achr1P02030_001 | Banana | nucleus | 60.59 | 63.06 |
| GSMUA_Achr11P... | Banana | nucleus | 59.8 | 62.12 |
| Os02t0116800-01 | Rice | nucleus | 58.63 | 58.63 |
| TraesCS6B01G062500.1 | Wheat | nucleus | 55.88 | 56.1 |
| TraesCS6D01G053500.1 | Wheat | nucleus | 55.88 | 55.99 |
| TraesCS6A01G046400.1 | Wheat | nucleus | 55.69 | 55.91 |
| HORVU0Hr1G040310.2 | Barley | cytosol, mitochondrion, nucleus | 55.88 | 55.45 |
| GSMUA_Achr2P10980_001 | Banana | nucleus | 44.9 | 54.39 |
| Zm00001d054034_P001 | Maize | nucleus | 56.67 | 52.45 |
| Os03t0120200-01 | Rice | nucleus | 43.14 | 52.01 |
| TraesCS4D01G343800.1 | Wheat | nucleus | 42.55 | 51.42 |
| GSMUA_Achr5P19220_001 | Banana | nucleus | 42.55 | 51.3 |
| EES06158 | Sorghum | nucleus, plastid | 57.25 | 51.23 |
| TraesCS5A01G517700.1 | Wheat | nucleus | 42.35 | 51.18 |
| TraesCS4B01G349100.1 | Wheat | nucleus | 42.35 | 50.94 |
| Zm00001d027403_P001 | Maize | nucleus | 42.35 | 50.94 |
| KXG40319 | Sorghum | nucleus | 41.96 | 50.47 |
| Zm00001d048481_P001 | Maize | cytosol, mitochondrion, nucleus | 40.98 | 49.64 |
| HORVU4Hr1G085140.6 | Barley | nucleus, plastid | 40.98 | 43.27 |
| VIT_10s0003g04090.t01 | Wine grape | nucleus | 41.18 | 39.92 |
| VIT_01s0010g02560.t01 | Wine grape | nucleus | 26.47 | 37.6 |
| VIT_09s0002g00360.t01 | Wine grape | nucleus | 23.73 | 26.54 |
| VIT_08s0007g08280.t01 | Wine grape | nucleus | 13.53 | 25.46 |
Protein Annotations
| EntrezGene:100251322 | wikigene:100251322 | MapMan:35.2 | ProteinID:CBI27484 | ProteinID:CBI27484.3 | ncoils:Coil |
| UniProt:D7TAG1 | EMBL:FN595754 | EntrezGene:LOC100251322 | wikigene:LOC100251322 | PFAM:PF03763 | PANTHER:PTHR31471 |
| PANTHER:PTHR31471:SF1 | InterPro:Remorin_C | UniParc:UPI0001BE2A51 | ArrayExpress:VIT_01s0010g01760 | EnsemblPlantsGene:VIT_01s0010g01760 | EnsemblPlants:VIT_01s0010g01760.t01 |
| unigene:Vvi.15357 | RefSeq:XP_002273344 | RefSeq:XP_002273344.2 | RefSeq:XP_003631344 | RefSeq:XP_003631344.1 | SEG:seg |
Description
No Description!
Coordinates
chr1:+:18163551..18172746
Molecular Weight (calculated)
56693.4 Da
IEP (calculated)
7.867
GRAVY (calculated)
-0.857
Length
510 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYERIQKPQ VGGGFSPGKL RTMLLGVEKK RKEEEGLDSN FSLRSQASEV DDGGGSYSDN CKDLDVVSEL PECSTSAAAD SLAPEMINDH RLKDHPSVNP
101: RIRFQEDLPF DYDSGHDGMC VSSSIFEFQK AERAPQRVPV GPFSKPAPSK WDDAQKWIAS PTSNRPKGGQ GVGSRKGYGN RQPSTKVVVE VPDQRLVPFE
201: EPDTKRIDPS HSKKESAGQK FVTWEVDSYP TADPYAKPVL MIENTVEESA ISLSRHDPSM SIHSATTFIP PPSTARSVSM RDMGTEMTPI ASQEPSRTGT
301: PVRATTPTRS PTSSRPSTPG RGAPASSPVG PLNDCLDSNK NELSEKEIQM KTRREIMVLG TQLGKMNIAA WASKEEEDKD ASTSLKTVAV EQPTKSVIET
401: RAAAWEEAEK AKYMARFERE ELKIQVWENH QKAKTEAEMR KIEVEVERIR GRAHDRLMNK LAAARHRAEE KRAAAEAKRS RQAAKTEQQA EYIRKTGRIP
501: SSFSCWNWCS
101: RIRFQEDLPF DYDSGHDGMC VSSSIFEFQK AERAPQRVPV GPFSKPAPSK WDDAQKWIAS PTSNRPKGGQ GVGSRKGYGN RQPSTKVVVE VPDQRLVPFE
201: EPDTKRIDPS HSKKESAGQK FVTWEVDSYP TADPYAKPVL MIENTVEESA ISLSRHDPSM SIHSATTFIP PPSTARSVSM RDMGTEMTPI ASQEPSRTGT
301: PVRATTPTRS PTSSRPSTPG RGAPASSPVG PLNDCLDSNK NELSEKEIQM KTRREIMVLG TQLGKMNIAA WASKEEEDKD ASTSLKTVAV EQPTKSVIET
401: RAAAWEEAEK AKYMARFERE ELKIQVWENH QKAKTEAEMR KIEVEVERIR GRAHDRLMNK LAAARHRAEE KRAAAEAKRS RQAAKTEQQA EYIRKTGRIP
501: SSFSCWNWCS
001: MDYERIGKTQ VTSSGGGFSP GKLRSMLLLG VDRKKNEEEE STPTMRSGSN QIDDPRVYVA SGLDDCKDVD VVSEITDCST SGIARSISLG LQEYSDYDNV
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS
Arabidopsis Description
At2g02170/F5O4.6 [Source:UniProtKB/TrEMBL;Acc:Q9ZUM1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.