Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d027403_P001 | Maize | nucleus | 93.63 | 93.63 |
| Zm00001d048481_P001 | Maize | cytosol, mitochondrion, nucleus | 89.39 | 90.02 |
| Os03t0120200-01 | Rice | nucleus | 81.13 | 81.32 |
| TraesCS5A01G517700.1 | Wheat | nucleus | 78.3 | 78.67 |
| TraesCS4D01G343800.1 | Wheat | nucleus | 78.3 | 78.67 |
| TraesCS4B01G349100.1 | Wheat | nucleus | 77.83 | 77.83 |
| HORVU4Hr1G085140.6 | Barley | nucleus, plastid | 76.89 | 67.49 |
| GSMUA_Achr5P11780_001 | Banana | cytosol | 35.38 | 46.44 |
| GSMUA_Achr1P02030_001 | Banana | nucleus | 53.07 | 45.92 |
| GSMUA_Achr11P... | Banana | nucleus | 50.47 | 43.58 |
| Bra026612.1-P | Field mustard | nucleus | 41.51 | 42.41 |
| VIT_01s0010g01760.t01 | Wine grape | nucleus | 50.47 | 41.96 |
| CDY09386 | Canola | nucleus | 39.62 | 41.9 |
| CDY03066 | Canola | nucleus | 39.62 | 41.69 |
| GSMUA_Achr2P10980_001 | Banana | nucleus | 41.04 | 41.33 |
| CDY15819 | Canola | nucleus | 42.69 | 40.95 |
| KRH58560 | Soybean | nucleus | 48.11 | 40.24 |
| CDY17607 | Canola | nucleus | 41.98 | 40.09 |
| KRH42459 | Soybean | nucleus | 47.88 | 39.8 |
| Bra024828.1-P | Field mustard | nucleus | 41.75 | 39.33 |
| AT2G02170.2 | Thale cress | nucleus | 44.1 | 38.48 |
| GSMUA_Achr5P19220_001 | Banana | nucleus | 37.03 | 37.12 |
| EES06158 | Sorghum | nucleus, plastid | 49.76 | 37.02 |
| Solyc01g008180.2.1 | Tomato | nucleus | 44.34 | 36.02 |
| KXG23993 | Sorghum | nucleus | 33.49 | 30.87 |
| OQU85140 | Sorghum | cytosol | 25.0 | 29.53 |
| EES05380 | Sorghum | mitochondrion | 21.23 | 27.03 |
| EES11442 | Sorghum | nucleus, plastid | 32.78 | 26.08 |
| EER99573 | Sorghum | nucleus | 17.22 | 23.32 |
| OQU90788 | Sorghum | nucleus | 14.15 | 20.55 |
| EES10116 | Sorghum | nucleus, plastid | 19.81 | 16.44 |
Protein Annotations
| EnsemblPlants:KXG40319 | EnsemblPlantsGene:SORBI_3001G528600 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF18 |
| PFAM:PF03763 | ProteinID:KXG40319 | ProteinID:KXG40319.1 | SEG:seg | UniParc:UPI0003C69672 | UniProt:A0A1B6QQX4 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:79273784..79278088
Molecular Weight (calculated)
46658.2 Da
IEP (calculated)
7.243
GRAVY (calculated)
-0.894
Length
424 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYERIHEPL PRRQSGGFSP AKLRAMLRGL EKHQRNNGED TSPEANDSGE LDDRRSLECS TSTEMSSNSG HRSRNRAPDD DSFDSESSSS GPPTVKRSTA
101: VAALLPPFSR PTPSKWDDAE KWISSPTSNR TGRAGPTAGT VPKKSALAFP EHGGRPPAVA KVVTDVPTNT GPLVKNSDGL ADPDLLKPAH NASIVDEPAP
201: AVRSVSMRDM GTEMTPIASQ EPSRTATPII ASSPTSSRTP TPQRTTELSV SNIDSNKMEM SEEELQISTR QEIMDLGERL GKTTIAAWAS KEEKTAAHST
301: STTAYKAVDI NRENRAADWQ EAEKAKYLAR FQMEEAKIQA WENLQKAKIE AEMKRIEAKI ERKRAREQDR LASKLAAVSH RAEAKREAAE VRRNQEAART
401: EEQAAQIRET GHTPSSFSCW CWCL
101: VAALLPPFSR PTPSKWDDAE KWISSPTSNR TGRAGPTAGT VPKKSALAFP EHGGRPPAVA KVVTDVPTNT GPLVKNSDGL ADPDLLKPAH NASIVDEPAP
201: AVRSVSMRDM GTEMTPIASQ EPSRTATPII ASSPTSSRTP TPQRTTELSV SNIDSNKMEM SEEELQISTR QEIMDLGERL GKTTIAAWAS KEEKTAAHST
301: STTAYKAVDI NRENRAADWQ EAEKAKYLAR FQMEEAKIQA WENLQKAKIE AEMKRIEAKI ERKRAREQDR LASKLAAVSH RAEAKREAAE VRRNQEAART
401: EEQAAQIRET GHTPSSFSCW CWCL
001: MDYERIGKTQ VTSSGGGFSP GKLRSMLLLG VDRKKNEEEE STPTMRSGSN QIDDPRVYVA SGLDDCKDVD VVSEITDCST SGIARSISLG LQEYSDYDNV
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS
Arabidopsis Description
At2g02170/F5O4.6 [Source:UniProtKB/TrEMBL;Acc:Q9ZUM1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.