Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plasma membrane 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P11780_001 | Banana | cytosol | 53.68 | 69.97 |
| GSMUA_Achr1P02030_001 | Banana | nucleus | 73.63 | 63.27 |
| GSMUA_Achr11P... | Banana | nucleus | 61.76 | 52.95 |
| GSMUA_Achr5P19220_001 | Banana | nucleus | 48.69 | 48.46 |
| CDY09386 | Canola | nucleus | 45.37 | 47.63 |
| Bra026612.1-P | Field mustard | nucleus | 46.56 | 47.23 |
| Os02t0116800-01 | Rice | nucleus | 54.87 | 45.29 |
| CDY15819 | Canola | nucleus | 47.51 | 45.25 |
| VIT_01s0010g01760.t01 | Wine grape | nucleus | 54.39 | 44.9 |
| TraesCS6A01G046400.1 | Wheat | nucleus | 53.21 | 44.09 |
| TraesCS6B01G062500.1 | Wheat | nucleus | 52.97 | 43.9 |
| TraesCS6D01G053500.1 | Wheat | nucleus | 52.97 | 43.81 |
| KRH58560 | Soybean | nucleus | 52.49 | 43.59 |
| CDY17607 | Canola | nucleus | 45.84 | 43.47 |
| HORVU0Hr1G040310.2 | Barley | cytosol, mitochondrion, nucleus | 52.97 | 43.39 |
| KRH42459 | Soybean | nucleus | 52.49 | 43.33 |
| Os03t0120200-01 | Rice | nucleus | 43.23 | 43.03 |
| Bra024828.1-P | Field mustard | nucleus | 45.84 | 42.89 |
| CDY03066 | Canola | nucleus | 40.62 | 42.43 |
| AT2G02170.2 | Thale cress | nucleus | 48.22 | 41.77 |
| KXG40319 | Sorghum | nucleus | 41.33 | 41.04 |
| Zm00001d054034_P001 | Maize | nucleus | 53.68 | 41.02 |
| Zm00001d048481_P001 | Maize | cytosol, mitochondrion, nucleus | 40.86 | 40.86 |
| Solyc01g008180.2.1 | Tomato | nucleus | 50.36 | 40.61 |
| Zm00001d027403_P001 | Maize | nucleus | 40.86 | 40.57 |
| EES06158 | Sorghum | nucleus, plastid | 54.87 | 40.53 |
| TraesCS4D01G343800.1 | Wheat | nucleus | 39.67 | 39.57 |
| TraesCS5A01G517700.1 | Wheat | nucleus | 39.19 | 39.1 |
| TraesCS4B01G349100.1 | Wheat | nucleus | 39.19 | 38.92 |
| GSMUA_Achr9P07790_001 | Banana | nucleus | 26.6 | 35.67 |
| HORVU4Hr1G085140.6 | Barley | nucleus, plastid | 38.95 | 33.95 |
| GSMUA_Achr3P17060_001 | Banana | nucleus | 27.55 | 33.62 |
| GSMUA_Achr10P... | Banana | nucleus | 35.63 | 27.68 |
| GSMUA_Achr6P00160_001 | Banana | nucleus | 17.1 | 26.57 |
| GSMUA_Achr5P26590_001 | Banana | nucleus | 30.4 | 25.15 |
| GSMUA_Achr4P33120_001 | Banana | nucleus | 15.91 | 24.63 |
| GSMUA_Achr2P13770_001 | Banana | cytosol, nucleus, plastid | 15.68 | 23.57 |
| GSMUA_Achr10P... | Banana | nucleus | 23.28 | 21.78 |
| GSMUA_Achr2P07310_001 | Banana | nucleus | 23.28 | 19.68 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P10980_001 | EnsemblPlants:GSMUA_Achr2T10980_001 | EnsemblPlantsGene:GSMUA_Achr2G10980_001 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 |
| PANTHER:PTHR31471:SF1 | PFAM:PF03763 | UniParc:UPI000296B67C | UniProt:M0S6Y9 | MapMan:35.2 | : |
Description
remorin family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G10980_001]
Coordinates
chr2:+:13968484..13970990
Molecular Weight (calculated)
45795.7 Da
IEP (calculated)
9.630
GRAVY (calculated)
-0.692
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSGHRSIEH AVGAPRIRSQ EKHSLESESV SSGFEFQKGE RTRPHRLTAA AAVVPPLSKP ARSKWDDAEK WIVSPTSNRG ANKPGGRQAN NVGLTGSGSQ
101: PTAAKVVLEV VDEAAAKRVD GSQAKTQISG IETVNWAGEP CATLDSEVKL AVVVENPVAD SAVNLSWHDS SSVQSATTLM TPNTTFRPVS MRDMGTEMTP
201: IASQEPSRTG TPARATSPLC SRTSSQPSSP QKMAPVSTQT ESGDCDEDFS NKELSRKELQ NKTMREIMIL GQQLGKTNIA AWASKKEDES DASTSTKTVL
301: KGQPAKSIVE ASAAWEEAKN TKYLASRFKR EEIKIQAWEN HQKATIEAEM RKIEVEIERM KALANEKLTN HLAAVRHKAQ EKRATAGARR NQQAAKTARQ
401: AEYIGRTGQV PSSFCCWSWC S
101: PTAAKVVLEV VDEAAAKRVD GSQAKTQISG IETVNWAGEP CATLDSEVKL AVVVENPVAD SAVNLSWHDS SSVQSATTLM TPNTTFRPVS MRDMGTEMTP
201: IASQEPSRTG TPARATSPLC SRTSSQPSSP QKMAPVSTQT ESGDCDEDFS NKELSRKELQ NKTMREIMIL GQQLGKTNIA AWASKKEDES DASTSTKTVL
301: KGQPAKSIVE ASAAWEEAKN TKYLASRFKR EEIKIQAWEN HQKATIEAEM RKIEVEIERM KALANEKLTN HLAAVRHKAQ EKRATAGARR NQQAAKTARQ
401: AEYIGRTGQV PSSFCCWSWC S
001: MDYERIGKTQ VTSSGGGFSP GKLRSMLLLG VDRKKNEEEE STPTMRSGSN QIDDPRVYVA SGLDDCKDVD VVSEITDCST SGIARSISLG LQEYSDYDNV
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS
Arabidopsis Description
At2g02170/F5O4.6 [Source:UniProtKB/TrEMBL;Acc:Q9ZUM1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.