Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0003g04090.t01 | Wine grape | nucleus | 47.42 | 48.86 |
| Zm00001d041496_P001 | Maize | nucleus | 32.66 | 46.46 |
| PGSC0003DMT400031464 | Potato | nucleus | 43.73 | 45.66 |
| Os12t0613600-01 | Rice | nucleus | 35.61 | 45.2 |
| KRH58701 | Soybean | nucleus | 43.73 | 43.89 |
| KRH42599 | Soybean | nucleus | 43.54 | 43.7 |
| KXG23993 | Sorghum | nucleus | 36.72 | 43.26 |
| TraesCS5D01G047600.3 | Wheat | cytosol | 35.42 | 42.86 |
| KRH44798 | Soybean | nucleus | 43.36 | 42.65 |
| GSMUA_Achr5P26590_001 | Banana | nucleus | 39.67 | 42.24 |
| TraesCS5A01G040500.1 | Wheat | nucleus | 34.87 | 42.09 |
| AT1G30320.1 | Thale cress | nucleus, plastid | 38.56 | 41.06 |
| CDY09599 | Canola | nucleus | 35.98 | 40.97 |
| Solyc08g045640.2.1 | Tomato | mitochondrion | 37.27 | 40.89 |
| GSMUA_Achr5P11780_001 | Banana | cytosol | 24.35 | 40.87 |
| TraesCS5B01G041700.1 | Wheat | mitochondrion, nucleus | 35.06 | 40.34 |
| Bra032380.1-P | Field mustard | nucleus | 35.98 | 40.21 |
| CDY26269 | Canola | nucleus | 35.61 | 39.79 |
| CDY12047 | Canola | nucleus | 36.35 | 39.4 |
| CDX90244 | Canola | nucleus | 36.16 | 39.2 |
| Bra010777.1-P | Field mustard | nucleus | 36.16 | 36.36 |
| GSMUA_Achr1P02030_001 | Banana | nucleus | 32.66 | 36.12 |
| GSMUA_Achr2P10980_001 | Banana | nucleus | 27.68 | 35.63 |
| HORVU5Hr1G009780.6 | Barley | cytosol | 31.55 | 35.33 |
| GSMUA_Achr11P... | Banana | nucleus | 31.92 | 35.23 |
| GSMUA_Achr5P19220_001 | Banana | nucleus | 23.62 | 30.26 |
| GSMUA_Achr9P07790_001 | Banana | nucleus | 17.16 | 29.62 |
| GSMUA_Achr3P17060_001 | Banana | nucleus | 18.45 | 28.99 |
| GSMUA_Achr6P00160_001 | Banana | nucleus | 10.33 | 20.66 |
| GSMUA_Achr2P07310_001 | Banana | nucleus | 18.82 | 20.48 |
| GSMUA_Achr10P... | Banana | nucleus | 16.79 | 20.22 |
| GSMUA_Achr2P13770_001 | Banana | cytosol, nucleus, plastid | 10.33 | 20.0 |
| GSMUA_Achr4P33120_001 | Banana | nucleus | 9.96 | 19.85 |
| CDY62474 | Canola | nucleus | 27.68 | 17.16 |
| CDY62472 | Canola | nucleus | 27.68 | 17.16 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P28730_001 | EnsemblPlants:GSMUA_Achr10T28730_001 | EnsemblPlantsGene:GSMUA_Achr10G28730_001 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 |
| PANTHER:PTHR31471:SF17 | PFAM:PF03763 | SEG:seg | UniParc:UPI000296B4B3 | UniProt:M0RM97 | MapMan:35.2 |
Description
remorin family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G28730_001]
Coordinates
chr10:+:31446688..31451854
Molecular Weight (calculated)
60333.5 Da
IEP (calculated)
9.677
GRAVY (calculated)
-0.850
Length
542 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYERIHKVQ MGVISPSKLR IKLLGSHGGR RKEGGNSSSR TSPSKLEEME HSKHSLLAGD LDEEGYSEVP RLELSVKEVL GYGQGDQTPS FRKEFLPKGK
101: ADICCNRAQD TVKSVSSLAE PTSNLSMVHP MRLPDEESFD YDSGHDNGSA RSFEFHKGER PSQQASSPFV RNLPSKWNDA ERWIVHRQIT HVKSNVSKKT
201: AALNLGSLQV ISNRVVFVPE SASADHRHSL MQEPDAKTSS STKSTSQNVA EKFSFAPNSS QSSLDSTSGL TDLSSVNSTY GGCFKKEFNH AVSEKSTAKA
301: TVSPLVQSVS MRDVGTEMTP IPSQDPSRNE TPVGAMTPAR TPLSSIPSSP KKGAQASSAA EANTHDRSRK SENSGNRELS DKELQLKTRR EIAALGIQLG
401: KMNIASWASK DDMAHASPPL DQEKIKTEYE ARAAAWEESQ KSEYTARHRR EEAKIQAWEN HQKAKYETKL RRVEAQAELM KARAQDKLVE KLSLTRRRVE
501: HKQAVAEANR NRQAARTAEQ VEQIRQTGRV YTPHIWCCSW FF
101: ADICCNRAQD TVKSVSSLAE PTSNLSMVHP MRLPDEESFD YDSGHDNGSA RSFEFHKGER PSQQASSPFV RNLPSKWNDA ERWIVHRQIT HVKSNVSKKT
201: AALNLGSLQV ISNRVVFVPE SASADHRHSL MQEPDAKTSS STKSTSQNVA EKFSFAPNSS QSSLDSTSGL TDLSSVNSTY GGCFKKEFNH AVSEKSTAKA
301: TVSPLVQSVS MRDVGTEMTP IPSQDPSRNE TPVGAMTPAR TPLSSIPSSP KKGAQASSAA EANTHDRSRK SENSGNRELS DKELQLKTRR EIAALGIQLG
401: KMNIASWASK DDMAHASPPL DQEKIKTEYE ARAAAWEESQ KSEYTARHRR EEAKIQAWEN HQKAKYETKL RRVEAQAELM KARAQDKLVE KLSLTRRRVE
501: HKQAVAEANR NRQAARTAEQ VEQIRQTGRV YTPHIWCCSW FF
001: MDYERIQKVQ KSIISPTKLR MKLMGPLNNM KREGSKSNSN SSRTSPSRLQ IPDDSEFSKN SLLASNSYSD DDVAATTTDI EVAKLPNEPV LYPTENDNQG
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8G3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.